RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TRAV8-3A0A0A6YYJ7 113 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 CRPP02741 224 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 IGLC1P0CG04 106 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 IFITM1P13164 125 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 C11orf52Q96A22 123 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 CELSR3Q9NYQ7 3312 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 E7EUB6 86 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 INSP01308 110 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 TCTEX1D4Q5JR98 221 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 PYGO2Q9BRQ0 406 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 CCL25O15444 150 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 A0A0U1RRA0 63 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 DEFB121Q5J5C9 76 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 CSTL1Q9H114 145 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 PRSS46E5RG02 174 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 PDE6HQ13956 83 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 C1orf229Q6ZS94 237 aaPredicted RBP7.36□□□□□ -1.23
CCDC113-201ENST00000219299 DEFB125Q8N687 156 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 TMEM75Q8N9X5 138 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 ZNF114Q8NC26 417 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 SHANK2-AS3Q9BTD1 123 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 ODF3BA8MYP8 253 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 C8orf86Q6ZUL3 223 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 RASL10AQ92737 203 aa7.36□□□□□ -1.23
CCDC113-201ENST00000219299 Q8N8P6 123 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 MYMXA0A1B0GTQ4 84 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 LINC00158P58513 81 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 ZNF876PQ49A33 203 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 DNAH14Q0VDD8 3507 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 MALP21145 153 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 DEFB131AP59861 70 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 NPC2P61916 151 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 Q8TAT8 98 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 IGLV2-23P01705 113 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 CEND1Q8N111 149 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 VGLL1Q99990 258 aa7.35□□□□□ -1.23
CCDC113-201ENST00000219299 DNAJC9-AS1A6NH13 148 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 H3BUA1 57 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 RPL35AP18077 110 aaKnown RBP7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GATD1Q8NB37 220 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 RCHY1Q96PM5 261 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 SPANXCQ9NY87 97 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 LINC01548A6NM66 108 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 NDUFA4O00483 81 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 BRWD1-AS2P59051 145 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GAGE2AQ6NT46 116 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 DNAJC30Q96LL9 226 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 SPTBN5Q9NRC6 3674 aaKnown RBP7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GAGE12JA6NER3 117 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GAGE7O76087 117 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GAGE12FP0CL80 117 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GAGE12GP0CL81 117 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GAGE12IP0CL82 117 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 GAGE4Q13068 117 aa7.34□□□□□ -1.23
CCDC113-201ENST00000219299 PHLDA1Q8WV24 401 aaPredicted RBP7.34□□□□□ -1.23
CCDC113-201ENST00000219299 IGSF10Q6WRI0 2623 aa7.34□□□□□ -1.24
CCDC113-201ENST00000219299 TMEM213A2RRL7 107 aa7.34□□□□□ -1.24
CCDC113-201ENST00000219299 A6NDX4 124 aa7.34□□□□□ -1.24
CCDC113-201ENST00000219299 ADARB2-AS1A8MUL3 147 aa7.34□□□□□ -1.24
CCDC113-201ENST00000219299 IGHG2P01859 326 aa7.34□□□□□ -1.24
CCDC113-201ENST00000219299 HOXD3P31249 432 aaPredicted RBP7.34□□□□□ -1.24
CCDC113-201ENST00000219299 TANC2Q9HCD6 1990 aa7.34□□□□□ -1.24
CCDC113-201ENST00000219299 LY6G6DO95868 133 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 UBE2DNLQ8IWF7 75 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 C14orf178Q8N769 122 aaPredicted RBP7.33□□□□□ -1.24
CCDC113-201ENST00000219299 SMR3AQ99954 134 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 K7EIM0 57 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 KLF5Q13887 457 aaPredicted RBP7.33□□□□□ -1.24
CCDC113-201ENST00000219299 CCL24O00175 119 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 AVPP01185 164 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 ZNF491Q8N8L2 437 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 WIPF2Q8TF74 440 aaPredicted RBP7.33□□□□□ -1.24
CCDC113-201ENST00000219299 H3BMG7 143 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 GAGE5Q13069 117 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 GAGE6Q13070 117 aa7.33□□□□□ -1.24
CCDC113-201ENST00000219299 LEPROTO15243 131 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 RPL36AP83881 106 aaKnown RBP7.32□□□□□ -1.24
CCDC113-201ENST00000219299 VWC2Q2TAL6 325 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 CFHR4Q92496 578 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 RPL36ALQ969Q0 106 aaKnown RBP7.32□□□□□ -1.24
CCDC113-201ENST00000219299 PSMG3-AS1Q96PY0 264 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 IGLV11-55A0A075B6I3 123 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 BOD1L2Q8IYS8 172 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 RNASE8Q8TDE3 154 aaKnown RBP7.32□□□□□ -1.24
CCDC113-201ENST00000219299 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 TEX22C9J3V5 150 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 IGKV1-17P01599 117 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 FOXE3Q13461 319 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 MRPL51Q4U2R6 128 aaKnown RBP7.32□□□□□ -1.24
CCDC113-201ENST00000219299 UBE2E2Q96LR5 201 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 FREM2Q5SZK8 3169 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 PAX4O43316 350 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 NACAE9PAV3 2078 aa7.32□□□□□ -1.24
CCDC113-201ENST00000219299 SRSF2Q01130 221 aaKnown RBP7.31□□□□□ -1.24
CCDC113-201ENST00000219299 C2orf66Q6UXQ4 117 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 SIGLEC8Q9NYZ4 499 aa7.31□□□□□ -1.24
CCDC113-201ENST00000219299 SLURP1P55000 103 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms