RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 Q6ZQT7 251 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
TUBB1-201ENST00000217133 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 KLHL30-AS1Q8NEE0 82 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 OR11H6Q8NGC7 330 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 SVIPQ8NHG7 77 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 PLEKHB2Q96CS7 222 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 C16orf92Q96LL3 132 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 PHLDA3Q9Y5J5 127 aa7.42□□□□□ -1.22
TUBB1-201ENST00000217133 FAM90A27PA6NNH2 459 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 A8MWV9 139 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 GRNP28799 593 aaKnown RBP7.41□□□□□ -1.22
TUBB1-201ENST00000217133 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
TUBB1-201ENST00000217133 Q6ZUT4 128 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 NFE4Q86UQ8 179 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 TOMM6Q96B49 74 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 TIMD4Q96H15 378 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 METTL26Q96S19 204 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 EMP1P54849 157 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 BAALCQ8WXS3 180 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
TUBB1-201ENST00000217133 CSMD2Q7Z408 3487 aa7.41□□□□□ -1.22
TUBB1-201ENST00000217133 GNLYP22749 145 aa7.4□□□□□ -1.22
TUBB1-201ENST00000217133 TEN1Q86WV5 123 aa7.4□□□□□ -1.22
TUBB1-201ENST00000217133 XGP55808 180 aa7.4□□□□□ -1.22
TUBB1-201ENST00000217133 VMO1Q7Z5L0 202 aa7.4□□□□□ -1.23
TUBB1-201ENST00000217133 LINC01560Q8TB33 94 aa7.4□□□□□ -1.23
TUBB1-201ENST00000217133 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.23
TUBB1-201ENST00000217133 DPH3P1Q9H4G8 78 aa7.4□□□□□ -1.23
TUBB1-201ENST00000217133 IGHV7-81A0A0B4J1V7 117 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 PRTN3P24158 256 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 DEFB104AQ8WTQ1 72 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 ANAPC13Q9BS18 74 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 VCX2Q9H322 139 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 UBE2D1P51668 147 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 RASL10AQ92737 203 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 IGHV4-4A0A075B6R2 117 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 ASIPP42127 132 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 TMEM170BQ5T4T1 132 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 LY6G5BQ8NDX9 201 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 ZFAND3Q9H8U3 227 aa7.39□□□□□ -1.23
TUBB1-201ENST00000217133 TRBV20-1A0A075B6N2 111 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 TRAV8-2A0A0B4J237 113 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 TCL1BO95988 128 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 FASNP49327 2511 aaKnown RBP7.38□□□□□ -1.23
TUBB1-201ENST00000217133 SVEP1Q4LDE5 3571 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 M0R1W7 72 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 C9orf47Q6ZRZ4 202 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 NDUFA11Q86Y39 141 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 RNF183Q96D59 192 aa7.38□□□□□ -1.23
TUBB1-201ENST00000217133 ZNF688P0C7X2 276 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 ZFAND6Q6FIF0 208 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 TEX29Q8N6K0 151 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 FAM110DQ8TAY7 271 aaPredicted RBP7.37□□□□□ -1.23
TUBB1-201ENST00000217133 TRAV21A0A0B4J279 112 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 H7C2G1 150 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 DUSP14O95147 198 aaKnown RBP7.37□□□□□ -1.23
TUBB1-201ENST00000217133 PAPPA-AS1Q5QFB9 102 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 ODF3BA8MYP8 253 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 TMEM262E9PQX1 116 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 IGF1P05019 195 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 UBE2D3P61077 147 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 UBE2D2P62837 147 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 RPL11P62913 178 aaKnown RBP7.37□□□□□ -1.23
TUBB1-201ENST00000217133 FHL3Q13643 280 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 PRR9Q5T870 116 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 OR10J6PQ8NGY7 276 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 EEF1AKMT3Q96AZ1 226 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 MRPL53Q96EL3 112 aaKnown RBP7.37□□□□□ -1.23
TUBB1-201ENST00000217133 CARD19Q96LW7 228 aa7.37□□□□□ -1.23
TUBB1-201ENST00000217133 ATP6V0E1O15342 81 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 CD7P09564 240 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 ADORA2A-AS1P86434 159 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 ANKRD29Q8N6D5 301 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 HELZ2Q9BYK8 2649 aaKnown RBP7.36□□□□□ -1.23
TUBB1-201ENST00000217133 CLPSL1A2RUU4 121 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 LINC01548A6NM66 108 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 G3V318 75 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 PPP1R17O96001 155 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 TP53TG1Q9Y2A0 90 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 A0A0J9YY99 117 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 F5H697 171 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 Q1RN00 199 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 C10orf126Q8N4M7 172 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 Q8N9W7 124 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 RAX2Q96IS3 184 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 CELSR2Q9HCU4 2923 aa7.36□□□□□ -1.23
TUBB1-201ENST00000217133 POLQO75417 2590 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 C9JAW5 83 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 LGALS3P17931 250 aaKnown RBP7.35□□□□□ -1.23
TUBB1-201ENST00000217133 RNASE4P34096 147 aaKnown RBP7.35□□□□□ -1.23
TUBB1-201ENST00000217133 ANXA2RQ3ZCQ2 193 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 PRO1854Q9UHT4 67 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 OOSP1A8MZH6 123 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 COX6B1P14854 86 aa7.35□□□□□ -1.23
TUBB1-201ENST00000217133 C9orf139Q6ZV77 190 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms