RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SOCS3O14543 225 aa18■□□□□ 0.47
TARBP1-201ENST00000040877 ANKHD1Q8IWZ3 2542 aaKnown RBP18■□□□□ 0.47
TARBP1-201ENST00000040877 KIR2DL5BA0A0G2JN68 375 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 KIR2DL5BA0A0G2JPC4 375 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 PRSS29PA6NIE9 313 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 KIR2DL5AQ8N109 375 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 A0A1W2PPM0 123 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 MYCNOSP40205 109 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 PPDPFLQ8WWR9 84 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 PKIGQ9Y2B9 76 aa17.99■□□□□ 0.47
TARBP1-201ENST00000040877 GAGE12HA6NDE8 117 aa17.98■□□□□ 0.47
TARBP1-201ENST00000040877 GAGE2AQ6NT46 116 aa17.98■□□□□ 0.47
TARBP1-201ENST00000040877 ODF3L1Q8IXM7 274 aa17.97■□□□□ 0.47
TARBP1-201ENST00000040877 TMEM126AQ9H061 195 aa17.97■□□□□ 0.47
TARBP1-201ENST00000040877 PRO1854Q9UHT4 67 aa17.97■□□□□ 0.47
TARBP1-201ENST00000040877 NXPH4O95158 308 aa17.97■□□□□ 0.47
TARBP1-201ENST00000040877 SPART-AS1P0CW21 52 aa17.97■□□□□ 0.47
TARBP1-201ENST00000040877 ZNF747Q9BV97 191 aa17.97■□□□□ 0.47
TARBP1-201ENST00000040877 COA6Q5JTJ3 125 aaKnown RBP17.96■□□□□ 0.47
TARBP1-201ENST00000040877 APRG1Q8IVJ8 170 aa17.96■□□□□ 0.47
TARBP1-201ENST00000040877 PIFOQ8TCI5 191 aa17.96■□□□□ 0.47
TARBP1-201ENST00000040877 C2orf70A6NJV1 201 aa17.96■□□□□ 0.47
TARBP1-201ENST00000040877 NCKAP5O14513 1909 aa17.96■□□□□ 0.47
TARBP1-201ENST00000040877 ATP5G1P05496 136 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 MRPL23Q16540 153 aaKnown RBP17.95■□□□□ 0.46
TARBP1-201ENST00000040877 IGHV4OR15-8A0A075B7B6 117 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 A0A087WW49 117 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 Q6ZVH6 145 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 A0A096LPF7 62 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 C9orf153Q5TBE3 101 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 LOXL1Q08397 574 aaPredicted RBP17.95■□□□□ 0.46
TARBP1-201ENST00000040877 MSMPQ1L6U9 139 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 UBE2WQ96B02 151 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 PRORYQ9H606 182 aa17.95■□□□□ 0.46
TARBP1-201ENST00000040877 C9orf47Q6ZRZ4 202 aa17.94■□□□□ 0.46
TARBP1-201ENST00000040877 FAM167A-AS1Q96KT0 104 aa17.94■□□□□ 0.46
TARBP1-201ENST00000040877 LRRC75A-AS1Q8N1F1 130 aa17.94■□□□□ 0.46
TARBP1-201ENST00000040877 NRGNQ92686 78 aa17.93■□□□□ 0.46
TARBP1-201ENST00000040877 HERV-K104P63124 156 aa17.93■□□□□ 0.46
TARBP1-201ENST00000040877 FSTL3O95633 263 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 MED14OSP0DP75 135 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 DAZ2Q13117 558 aaKnown RBP17.92■□□□□ 0.46
TARBP1-201ENST00000040877 DAZ4Q86SG3 579 aaKnown RBP17.92■□□□□ 0.46
TARBP1-201ENST00000040877 C4orf3Q8WVX3 66 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 LINC00574Q9H8X3 128 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 DAZ3Q9NR90 486 aaKnown RBP17.92■□□□□ 0.46
TARBP1-201ENST00000040877 A0A0J9YY99 117 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 CCL25O15444 150 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 CEND1Q8N111 149 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 CLPSL1A2RUU4 121 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 FGF6P10767 208 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 ICOSQ9Y6W8 199 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 CUL9Q8IWT3 2517 aa17.92■□□□□ 0.46
TARBP1-201ENST00000040877 SLC25A29Q8N8R3 303 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 SCRT2Q9NQ03 307 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 K7EQD1 137 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 A6NDX4 124 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 IGLV2-14P01704 120 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 COL4A3Q01955 1670 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 TNFRSF13BO14836 293 aaPredicted RBP17.91■□□□□ 0.46
TARBP1-201ENST00000040877 CGB3P0DN86 165 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 MORN5Q5VZ52 161 aa17.91■□□□□ 0.46
TARBP1-201ENST00000040877 H3BMG7 143 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 ASPHD1Q5U4P2 390 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 SUMO4Q6EEV6 95 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 DKK2Q9UBU2 259 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 NOTCH2Q04721 2471 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 ATP6V0E2Q8NHE4 81 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 SPG11Q96JI7 2443 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 C1orf43Q9BWL3 253 aa17.9■□□□□ 0.46
TARBP1-201ENST00000040877 IGKV2D-24A0A075B6R9 120 aa17.89■□□□□ 0.46
TARBP1-201ENST00000040877 TRBV6-1A0A0K0K1D8 114 aa17.89■□□□□ 0.46
TARBP1-201ENST00000040877 UTF1Q5T230 341 aa17.89■□□□□ 0.45
TARBP1-201ENST00000040877 INSL3P51460 131 aa17.88■□□□□ 0.45
TARBP1-201ENST00000040877 XCL1P47992 114 aa17.88■□□□□ 0.45
TARBP1-201ENST00000040877 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.88■□□□□ 0.45
TARBP1-201ENST00000040877 IGKV2-29A2NJV5 120 aaPredicted RBP17.88■□□□□ 0.45
TARBP1-201ENST00000040877 PLCE1Q9P212 2302 aa17.88■□□□□ 0.45
TARBP1-201ENST00000040877 K7ERJ3 54 aa17.87■□□□□ 0.45
TARBP1-201ENST00000040877 WISP2O76076 250 aa17.87■□□□□ 0.45
TARBP1-201ENST00000040877 KMT2EQ8IZD2 1858 aa17.87■□□□□ 0.45
TARBP1-201ENST00000040877 LINC01545Q5VT33 79 aa17.87■□□□□ 0.45
TARBP1-201ENST00000040877 PRSS47A8MTI9 375 aa17.87■□□□□ 0.45
TARBP1-201ENST00000040877 GYPEP15421 78 aa17.87■□□□□ 0.45
TARBP1-201ENST00000040877 DEFB125Q8N687 156 aa17.87■□□□□ 0.45
TARBP1-201ENST00000040877 RNASE13Q5GAN3 156 aaKnown RBP17.86■□□□□ 0.45
TARBP1-201ENST00000040877 CITED1Q99966 193 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 IGKV1OR2-108A0A075B7D4 117 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 LMO4P61968 165 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 UBL5Q9BZL1 73 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 IFITM1P13164 125 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 CLPSL2Q6UWE3 100 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 AMTNQ6UX39 209 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 MRAPQ8TCY5 172 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 RPL32P62910 135 aaKnown RBP17.86■□□□□ 0.45
TARBP1-201ENST00000040877 SPANXDQ9BXN6 97 aa17.86■□□□□ 0.45
TARBP1-201ENST00000040877 CGB7P0DN87 165 aa17.85■□□□□ 0.45
TARBP1-201ENST00000040877 CCL18P55774 89 aa17.85■□□□□ 0.45
TARBP1-201ENST00000040877 ODF3BA8MYP8 253 aa17.85■□□□□ 0.45
TARBP1-201ENST00000040877 ADAMTS9Q9P2N4 1935 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms