RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 C11orf52Q96A22 123 aa12.89□□□□□ -0.35
VPS72-207ENST00000640458 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
VPS72-207ENST00000640458 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
VPS72-207ENST00000640458 C7orf71A4D174 169 aa12.88□□□□□ -0.35
VPS72-207ENST00000640458 ZNF138P52744 262 aa12.88□□□□□ -0.35
VPS72-207ENST00000640458 DAD1P61803 113 aa12.88□□□□□ -0.35
VPS72-207ENST00000640458 EIF4E3Q8N5X7 224 aaKnown RBP12.88□□□□□ -0.35
VPS72-207ENST00000640458 RNASE8Q8TDE3 154 aaKnown RBP12.88□□□□□ -0.35
VPS72-207ENST00000640458 TMEM263Q8WUH6 116 aaKnown RBP12.88□□□□□ -0.35
VPS72-207ENST00000640458 PYGO2Q9BRQ0 406 aa12.88□□□□□ -0.35
VPS72-207ENST00000640458 PKD1P98161 4303 aa12.88□□□□□ -0.35
VPS72-207ENST00000640458 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
VPS72-207ENST00000640458 FLI1Q01543 452 aaPredicted RBP12.87□□□□□ -0.35
VPS72-207ENST00000640458 ZFAND2AQ8N6M9 145 aa12.87□□□□□ -0.35
VPS72-207ENST00000640458 ZNF324O75467 553 aaPredicted RBP12.86□□□□□ -0.35
VPS72-207ENST00000640458 GPX1P07203 203 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 P0DMU3 169 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 FAM231AP0DMU4 169 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 FAM231CP0DMU5 169 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 TMEM183BQ1AE95 376 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 FAM74A3Q4VXF1 159 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 SAPCD1Q5SSQ6 148 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 FAM210BQ96KR6 192 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 PSG8Q9UQ74 426 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
VPS72-207ENST00000640458 LENEPQ9Y5L5 61 aa12.86□□□□□ -0.35
VPS72-207ENST00000640458 RNASE4P34096 147 aaKnown RBP12.85□□□□□ -0.35
VPS72-207ENST00000640458 ZNF674Q2M3X9 581 aa12.85□□□□□ -0.35
VPS72-207ENST00000640458 SOHLH1Q5JUK2 328 aa12.85□□□□□ -0.35
VPS72-207ENST00000640458 PRNTQ86SH4 94 aa12.85□□□□□ -0.35
VPS72-207ENST00000640458 MAPKAPK5-AS1Q8N8E1 139 aa12.85□□□□□ -0.35
VPS72-207ENST00000640458 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
VPS72-207ENST00000640458 ZFP30Q9Y2G7 519 aa12.85□□□□□ -0.35
VPS72-207ENST00000640458 KLF12Q9Y4X4 402 aa12.85□□□□□ -0.35
VPS72-207ENST00000640458 TRAV34A0A0B4J273 112 aa12.84□□□□□ -0.35
VPS72-207ENST00000640458 RPL35P42766 123 aaKnown RBP12.84□□□□□ -0.35
VPS72-207ENST00000640458 SRSF3P84103 164 aaKnown RBP12.84□□□□□ -0.35
VPS72-207ENST00000640458 LGALS9BQ3B8N2 356 aa12.84□□□□□ -0.35
VPS72-207ENST00000640458 Q8TAT8 98 aa12.84□□□□□ -0.35
VPS72-207ENST00000640458 NDUFAF3Q9BU61 184 aa12.84□□□□□ -0.35
VPS72-207ENST00000640458 PARLQ9H300 379 aa12.84□□□□□ -0.35
VPS72-207ENST00000640458 NOP10Q9NPE3 64 aaKnown RBP12.84□□□□□ -0.35
VPS72-207ENST00000640458 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 ZNF727A8MUV8 499 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 DEFB130BP0DP73 79 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 DEFB130AP0DP74 79 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 HTN3P15516 51 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 GNG4P50150 75 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 PRR9Q5T870 116 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 BAGE2Q86Y30 109 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 SGK494Q96LW2 274 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 SMIM7Q9BQ49 75 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 HSPG2P98160 4391 aa12.83□□□□□ -0.36
VPS72-207ENST00000640458 IGLV2-18A0A075B6J9 118 aa12.82□□□□□ -0.36
VPS72-207ENST00000640458 TRAV8-1A0A0A6YYK1 113 aa12.82□□□□□ -0.36
VPS72-207ENST00000640458 CBY3A6NI87 242 aa12.82□□□□□ -0.36
VPS72-207ENST00000640458 SFTA3P0C7M3 94 aa12.82□□□□□ -0.36
VPS72-207ENST00000640458 ANXA2RQ3ZCQ2 193 aa12.82□□□□□ -0.36
VPS72-207ENST00000640458 BIN3Q9NQY0 253 aa12.82□□□□□ -0.36
VPS72-207ENST00000640458 Q86TA4 180 aa12.81□□□□□ -0.36
VPS72-207ENST00000640458 LINC00612Q8N6U2 182 aa12.81□□□□□ -0.36
VPS72-207ENST00000640458 SMIM12Q96EX1 92 aa12.81□□□□□ -0.36
VPS72-207ENST00000640458 SNURFLB1AK76 121 aa12.8□□□□□ -0.36
VPS72-207ENST00000640458 C9JCJ5 164 aa12.8□□□□□ -0.36
VPS72-207ENST00000640458 DAZ2Q13117 558 aaKnown RBP12.8□□□□□ -0.36
VPS72-207ENST00000640458 SMUG1Q53HV7 270 aa12.8□□□□□ -0.36
VPS72-207ENST00000640458 CENPWQ5EE01 88 aa12.8□□□□□ -0.36
VPS72-207ENST00000640458 DERL1Q9BUN8 251 aa12.8□□□□□ -0.36
VPS72-207ENST00000640458 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 TMEM218A2RU14 115 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 C9JQL5 133 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 F8W036 122 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 LTAP01374 205 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 IGLV2-11P01706 119 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 ATP5G1P05496 136 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 TMEM241Q24JQ0 296 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 Q6ZQT7 251 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 TMEM183AQ8IXX5 376 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 C11orf72Q8NBR9 251 aa12.79□□□□□ -0.36
VPS72-207ENST00000640458 C16orf90A8MZG2 172 aa12.78□□□□□ -0.36
VPS72-207ENST00000640458 Q6AWC8 147 aa12.78□□□□□ -0.36
VPS72-207ENST00000640458 TMEM88Q6PEY1 159 aa12.78□□□□□ -0.36
VPS72-207ENST00000640458 Q6ZR54 194 aa12.78□□□□□ -0.36
VPS72-207ENST00000640458 UBE2DNLQ8IWF7 75 aa12.78□□□□□ -0.36
VPS72-207ENST00000640458 NAT8Q9UHE5 227 aa12.78□□□□□ -0.36
VPS72-207ENST00000640458 LY96Q9Y6Y9 160 aa12.78□□□□□ -0.36
VPS72-207ENST00000640458 MGST1P10620 155 aaKnown RBP12.77□□□□□ -0.37
VPS72-207ENST00000640458 IBA57Q5T440 356 aaKnown RBP12.77□□□□□ -0.37
VPS72-207ENST00000640458 SLC7A5P1Q8MH63 180 aa12.77□□□□□ -0.37
VPS72-207ENST00000640458 SEC11CQ9BY50 192 aa12.77□□□□□ -0.37
VPS72-207ENST00000640458 GSN-AS1Q9NRJ2 163 aa12.77□□□□□ -0.37
VPS72-207ENST00000640458 GAGE12BA1L429 117 aa12.76□□□□□ -0.37
VPS72-207ENST00000640458 KRBOX1C9JBD0 128 aa12.76□□□□□ -0.37
VPS72-207ENST00000640458 F5H768 121 aa12.76□□□□□ -0.37
VPS72-207ENST00000640458 GAGE7O76087 117 aa12.76□□□□□ -0.37
VPS72-207ENST00000640458 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
VPS72-207ENST00000640458 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms