RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 RAB37Q96AX2 223 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 A0A087WX48 190 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 GNLYP22749 145 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 GCSHP23434 173 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 TAL2Q16559 108 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 GLMPQ8WWB7 406 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 ITLN2Q8WWU7 325 aaPredicted RBP11.11□□□□□ -0.63
CLN6-215ENST00000636674 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
CLN6-215ENST00000636674 MEGF9Q9H1U4 602 aa11.11□□□□□ -0.63
CLN6-215ENST00000636674 RELNP78509 3460 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 TRAV12-1A0A0B4J245 112 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 FAM223BA6NKX1 122 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 SAP30O75446 220 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 SAMD5Q5TGI4 173 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 FAM223AQ8IWN6 122 aa11.1□□□□□ -0.63
CLN6-215ENST00000636674 MRPL35Q9NZE8 188 aaKnown RBP11.1□□□□□ -0.63
CLN6-215ENST00000636674 A0A1W2PPR1 153 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 LINC01548A6NM66 108 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 G3V4G9 280 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 PLNP26678 52 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 CEND1Q8N111 149 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 TTTY13Q9BZ97 58 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 CSTL1Q9H114 145 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 UFC1Q9Y3C8 167 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 LRRK2Q5S007 2527 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 K7EMI3 77 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 NPFFO15130 113 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 SLC25A16P16260 332 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 ATP5G2Q06055 141 aa11.09□□□□□ -0.63
CLN6-215ENST00000636674 USP9XQ93008 2570 aaPredicted RBP11.08□□□□□ -0.64
CLN6-215ENST00000636674 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 TRAV40A0A0B4J280 105 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 LINC01619G3V211 115 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 EFNA4P52798 201 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 LMO4P61968 165 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 PRR9Q5T870 116 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 H3BVH4 76 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 C16orf92Q96LL3 132 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 LINC00477Q96M19 166 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
CLN6-215ENST00000636674 DOPEY2Q9Y3R5 2298 aa11.07□□□□□ -0.64
CLN6-215ENST00000636674 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
CLN6-215ENST00000636674 ZNF207O43670 478 aaKnown RBP11.07□□□□□ -0.64
CLN6-215ENST00000636674 MOB4Q9Y3A3 225 aa11.07□□□□□ -0.64
CLN6-215ENST00000636674 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 F8VRH5 84 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
CLN6-215ENST00000636674 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 ZFAND2AQ8N6M9 145 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 C20orf78Q9BR46 151 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 PTPN13Q12923 2485 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 M0R381 172 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 SOCS3O14543 225 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 Q6ZQT7 251 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
CLN6-215ENST00000636674 TRAV21A0A0B4J279 112 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 E9PLD3 99 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 H7C1H1 209 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 OVOL1O14753 267 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 BRI3O95415 125 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 TOMM6Q96B49 74 aa11.05□□□□□ -0.64
CLN6-215ENST00000636674 NDUFA4O00483 81 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 SUMO2P61956 95 aaKnown RBP11.04□□□□□ -0.64
CLN6-215ENST00000636674 MAPKAPK5-AS1Q8N8E1 139 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 FAM19A4Q96LR4 140 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 DPH3P1Q9H4G8 78 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 TRBV7-9A0A0J9YWB2 115 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 K7ERJ3 54 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 RASL10AQ92737 203 aa11.04□□□□□ -0.64
CLN6-215ENST00000636674 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
CLN6-215ENST00000636674 SPTAN1Q13813 2472 aaKnown RBP11.03□□□□□ -0.64
CLN6-215ENST00000636674 ARL3P36405 182 aa11.03□□□□□ -0.64
CLN6-215ENST00000636674 SPTBN1Q01082 2364 aaKnown RBP11.03□□□□□ -0.64
CLN6-215ENST00000636674 ASIPP42127 132 aa11.02□□□□□ -0.64
CLN6-215ENST00000636674 DOPEY1Q5JWR5 2465 aa11.02□□□□□ -0.64
CLN6-215ENST00000636674 NEXN-AS1Q8NBZ9 246 aa11.02□□□□□ -0.64
CLN6-215ENST00000636674 OR10J6PQ8NGY7 276 aa11.02□□□□□ -0.64
CLN6-215ENST00000636674 UBTD1Q9HAC8 227 aa11.02□□□□□ -0.64
CLN6-215ENST00000636674 CSMD1Q96PZ7 3565 aa11.02□□□□□ -0.64
CLN6-215ENST00000636674 TRBV7-3A0A075B6L6 115 aa11.02□□□□□ -0.65
CLN6-215ENST00000636674 A0A1B0GWB2 263 aa11.02□□□□□ -0.65
CLN6-215ENST00000636674 IGLL5B9A064 214 aa11.02□□□□□ -0.65
CLN6-215ENST00000636674 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
CLN6-215ENST00000636674 H3BUA1 57 aa11.02□□□□□ -0.65
CLN6-215ENST00000636674 IGF1P05019 195 aa11.02□□□□□ -0.65
CLN6-215ENST00000636674 POM121L12Q8N7R1 296 aa11.02□□□□□ -0.65
CLN6-215ENST00000636674 USP9YO00507 2555 aaPredicted RBP11.01□□□□□ -0.65
CLN6-215ENST00000636674 CHTOPQ9Y3Y2 248 aaKnown RBP11.01□□□□□ -0.65
CLN6-215ENST00000636674 OR11H12B2RN74 326 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms