RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 EIF5AL1Q6IS14 154 aaKnown RBP1.64□□□□□ -2.15
CLN5-212ENST00000636602 Q8N2B8 174 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 FAM24BQ8N5W8 94 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 CCL4L1Q8NHW4 92 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 TEX47Q8TBZ9 253 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 ZNF418Q8TF45 676 aaPredicted RBP1.64□□□□□ -2.15
CLN5-212ENST00000636602 SFT2D1Q8WV19 159 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 SKA2Q8WVK7 121 aaPredicted RBP1.64□□□□□ -2.15
CLN5-212ENST00000636602 TEX37Q96LM6 180 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 NPCDR1Q9BY65 106 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 TCEAL2Q9H3H9 227 aaPredicted RBP1.64□□□□□ -2.15
CLN5-212ENST00000636602 C14orf132Q9NPU4 83 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 OTOGLQ3ZCN5 2332 aa1.64□□□□□ -2.15
CLN5-212ENST00000636602 ASCC3Q8N3C0 2202 aaKnown RBP1.64□□□□□ -2.15
CLN5-212ENST00000636602 SNRNP200O75643 2136 aaKnown RBP1.64□□□□□ -2.15
CLN5-212ENST00000636602 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
CLN5-212ENST00000636602 LAMA5O15230 3695 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 UQCRHLA0A096LP55 91 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 TRAV12-1A0A0B4J245 112 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 IGKV2-29A2NJV5 120 aaPredicted RBP1.63□□□□□ -2.15
CLN5-212ENST00000636602 TLCD2A6NGC4 264 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 A8MWV9 139 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 H3BQF6 201 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 SMIM24O75264 130 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 PIAS1O75925 651 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 TRGC2P03986 189 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 CSN2P05814 226 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 CRHP06850 196 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 UQCRHP07919 91 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 CMPK1P30085 196 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 DEFB124Q8NES8 71 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 DYDC1Q8WWB3 177 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 LCN9Q8WX39 176 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 PATE1Q8WXA2 126 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 GPX7Q96SL4 187 aaPredicted RBP1.63□□□□□ -2.15
CLN5-212ENST00000636602 MRPL57Q9BQC6 102 aaKnown RBP1.63□□□□□ -2.15
CLN5-212ENST00000636602 LINC00467Q9BRT7 94 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 MED9Q9NWA0 146 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 MED11Q9P086 117 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 U3KQA8 63 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 UNC13CQ8NB66 2214 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 CACNA1HO95180 2353 aa1.63□□□□□ -2.15
CLN5-212ENST00000636602 FREM2Q5SZK8 3169 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 SPAARA0A1B0GVQ0 90 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 GPR31O00270 319 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 RNASE3P12724 160 aaKnown RBP1.62□□□□□ -2.15
CLN5-212ENST00000636602 DNAJB13P59910 316 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 RAB4BP61018 213 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 LTC4SQ16873 150 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 DEFB113Q30KQ7 82 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 CCSMST1Q4G0I0 132 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 MED12LQ86YW9 2145 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 Q8IYB0 196 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 CLECL1Q8IZS7 167 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 C4orf33Q8N1A6 199 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 OR2T35Q8NGX2 323 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 OR10K1Q8NGX5 313 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 NAT14Q8WUY8 206 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 PLEKHB2Q96CS7 222 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 AIF1LQ9BQI0 150 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 EFCAB11Q9BUY7 163 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 DDA1Q9BW61 102 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 CENPHQ9H3R5 247 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 GOLGA4Q13439 2230 aaKnown RBP1.62□□□□□ -2.15
CLN5-212ENST00000636602 ASXL3Q9C0F0 2248 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 FAM186AA6NE01 2351 aa1.62□□□□□ -2.15
CLN5-212ENST00000636602 CFAP47Q6ZTR5 3102 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 A0A1B0GV72 72 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 MAP1LC3B2A6NCE7 125 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 E7EQ34 232 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 CXCL1P09341 107 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 TMBIM6P55061 237 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.61□□□□□ -2.15
CLN5-212ENST00000636602 NUP35Q8NFH5 326 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 MAP1LC3BQ9GZQ8 125 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 CYSTM1Q9H1C7 97 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 SPENQ96T58 3664 aaKnown RBP1.61□□□□□ -2.15
CLN5-212ENST00000636602 GVINP1Q7Z2Y8 2422 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 BSNQ9UPA5 3926 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 CELSR3Q9NYQ7 3312 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 SCN3AQ9NY46 2000 aa1.61□□□□□ -2.15
CLN5-212ENST00000636602 EP300Q09472 2414 aaPredicted RBP1.6□□□□□ -2.15
CLN5-212ENST00000636602 FRYQ5TBA9 3013 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 IGKV3D-7A0A0C4DH55 119 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 IGKV3OR2-268A0A0C4DH90 116 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 ODAMA1E959 279 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 H0YGG7 62 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 TNFSF15O95150 251 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 CCL4P13236 92 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 B2MP61769 119 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 DCDP81605 110 aaKnown RBP1.6□□□□□ -2.15
CLN5-212ENST00000636602 DEFB110Q30KQ9 67 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 UNQ6190/PRO20217Q6UXQ8 127 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 SMIM15Q7Z3B0 74 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 OR4K15Q8NH41 348 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 PPP3R2Q96LZ3 170 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 ZNF714Q96N38 554 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 RNF11Q9Y3C5 154 aa1.6□□□□□ -2.15
CLN5-212ENST00000636602 AKAP13Q12802 2813 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms