RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 IBA57Q5T440 356 aaKnown RBP5.36□□□□□ -1.55
CIITA-214ENST00000636238 TMEM78Q5T7P6 136 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 GDF5OSQ5U4N7 250 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 C9orf47Q6ZRZ4 202 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 POM121L12Q8N7R1 296 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 C15orf54Q8N8G6 183 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 NUDT10Q8NFP7 164 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 OR10J6PQ8NGY7 276 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 OR11H2Q8NH07 326 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 NUDT11Q96G61 164 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 OSTCQ9NRP0 149 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 CLEC5AQ9NY25 188 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 ZFP30Q9Y2G7 519 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 V9GYV3 84 aa5.36□□□□□ -1.55
CIITA-214ENST00000636238 LRP1BQ9NZR2 4599 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 TGIF2-C20orf24A0A0A6YYL0 155 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 KNCNA6PVL3 124 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 COLCA2A8K830 154 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 ZNF705GA8MUZ8 300 aaPredicted RBP5.35□□□□□ -1.55
CIITA-214ENST00000636238 NPIPB6E9PJ23 425 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 J3KRW8 73 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 PPP1R2P9O14990 202 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 CA1P00915 261 aaPredicted RBP5.35□□□□□ -1.55
CIITA-214ENST00000636238 IGKV3-20P01619 116 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 CXCL1P09341 107 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 CRIP1P50238 77 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 ZNF138P52744 262 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 TCL1AP56279 114 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 FAM3BP58499 235 aaPredicted RBP5.35□□□□□ -1.55
CIITA-214ENST00000636238 DEFB131AP59861 70 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 SNRPD3P62318 126 aaKnown RBP5.35□□□□□ -1.55
CIITA-214ENST00000636238 ELOBQ15370 118 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 OR8A1Q8NGG7 326 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 DAZAP1Q96EP5 407 aaKnown RBP5.35□□□□□ -1.55
CIITA-214ENST00000636238 YPEL4Q96NS1 127 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 ZNF492Q9P255 531 aa5.35□□□□□ -1.55
CIITA-214ENST00000636238 TRAV2A0A0B4J234 112 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 C19orf71A6NCJ1 209 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 FBLL1A6NHQ2 334 aaKnown RBP5.34□□□□□ -1.55
CIITA-214ENST00000636238 RTL8CO15255 209 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 SH2D1AO60880 128 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 PFN1P07737 140 aaKnown RBP5.34□□□□□ -1.55
CIITA-214ENST00000636238 GZMBP10144 247 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 MIFP14174 115 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 RPL35AP18077 110 aaKnown RBP5.34□□□□□ -1.55
CIITA-214ENST00000636238 RPL19P84098 196 aaKnown RBP5.34□□□□□ -1.55
CIITA-214ENST00000636238 SMUG1Q53HV7 270 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 SAPCD1Q5SSQ6 148 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 PRR9Q5T870 116 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 SAMD13Q5VXD3 122 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 Q6ZQT7 251 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 FAM231DQ6ZW35 169 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 APRG1Q8IVJ8 170 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 SMIM12Q96EX1 92 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 FAM210BQ96KR6 192 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 LINC00477Q96M19 166 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 NDFIP1Q9BT67 221 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 TMEM242Q9NWH2 141 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 IL36BQ9NZH7 164 aa5.34□□□□□ -1.55
CIITA-214ENST00000636238 IGHV4-4A0A075B6R2 117 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 TMSB15BA0A087X1C1 80 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 A0A0J9YX75 114 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 A0A1W2PPQ1 181 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 SPINK4O60575 86 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 P01737 135 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 S100PP25815 95 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 RNASE4P34096 147 aaKnown RBP5.33□□□□□ -1.56
CIITA-214ENST00000636238 FXYD7P58549 80 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 KIR3DS1Q14943 382 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 FAM162BQ5T6X4 162 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 EBLN2Q6P2I7 272 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 Q8NAQ8 132 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 OR4B1Q8NGF8 309 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 OR2D3Q8NGH3 330 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 SAV1Q9H4B6 383 aaPredicted RBP5.33□□□□□ -1.56
CIITA-214ENST00000636238 RPP21Q9H633 154 aaKnown RBP5.33□□□□□ -1.56
CIITA-214ENST00000636238 BIN3Q9NQY0 253 aa5.33□□□□□ -1.56
CIITA-214ENST00000636238 TMA7Q9Y2S6 64 aaKnown RBP5.33□□□□□ -1.56
CIITA-214ENST00000636238 DNAH5Q8TE73 4624 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 TMEM189A5PLL7 270 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 ORM1P02763 201 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 GPX1P07203 203 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 ACTL10Q5JWF8 245 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 MORN3Q6PF18 240 aaPredicted RBP5.32□□□□□ -1.56
CIITA-214ENST00000636238 KCNIP4Q6PIL6 250 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 FOXI2Q6ZQN5 318 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 COX8CQ7Z4L0 72 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 ZFAND2AQ8N6M9 145 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 FAM19A4Q96LR4 140 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 NDUFAF3Q9BU61 184 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 PPP1R14DQ9NXH3 145 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 C11orf21Q9P2W6 132 aa5.32□□□□□ -1.56
CIITA-214ENST00000636238 MUC4Q99102 2169 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 DMBT1Q9UGM3 2413 aaPredicted RBP5.31□□□□□ -1.56
CIITA-214ENST00000636238 SMIM27A0A1W2PRY6 76 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 GRIFINA4D1Z8 144 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 FABP5P3A8MUU1 101 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 M0R2Z0 102 aa5.31□□□□□ -1.56
CIITA-214ENST00000636238 DUSP14O95147 198 aaKnown RBP5.31□□□□□ -1.56
CIITA-214ENST00000636238 RAB5AP20339 215 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms