RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 CSN1S1P47710 185 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 CRIP1P50238 77 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 PKIAP61925 76 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 HBBP68871 147 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 KIAA1644Q3SXP7 199 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 C1orf194Q5T5A4 169 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 TCF24Q7RTU0 167 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 CLUHP3Q96NS8 147 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.35
SMAD4-217ENST00000611848 DNAH9Q9NYC9 4486 aa6.59□□□□□ -1.36
SMAD4-217ENST00000611848 A8MZ25 164 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 SRIP30626 198 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 IQCJQ1A5X6 159 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 OR2D3Q8NGH3 330 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 IGHV3-66A0A0C4DH42 116 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 OR4C46A6NHA9 309 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 GPX1P07203 203 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 CD7P09564 240 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 CMC4P56277 68 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-217ENST00000611848 Q6ZWC4 215 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 GATD1Q8NB37 220 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 C18orf32Q8TCD1 76 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 KCNS1Q96KK3 526 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 PGLYRP4Q96LB8 373 aa6.58□□□□□ -1.36
SMAD4-217ENST00000611848 ALKBH7Q9BT30 221 aaPredicted RBP6.58□□□□□ -1.36
SMAD4-217ENST00000611848 TGP01266 2768 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 TRAV2A0A0B4J234 112 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 IGHV4-30-4P0DP06 118 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 CAMPP49913 170 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 RPL11P62913 178 aaKnown RBP6.57□□□□□ -1.36
SMAD4-217ENST00000611848 SAPCD1Q5SSQ6 148 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 GLMPQ8WWB7 406 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 RCHY1Q96PM5 261 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 B9D2Q9BPU9 175 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 FAM110AQ9BQ89 295 aa6.57□□□□□ -1.36
SMAD4-217ENST00000611848 IGKV2-40A0A087WW87 121 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-217ENST00000611848 TSTD3H0UI37 97 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 IGKV2D-40P01614 121 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-217ENST00000611848 CT45A10P0DMU9 189 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 Q6AWC8 147 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 ZNF664Q8N3J9 261 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 C8orf49Q96NF6 230 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 SLC50A1Q9BRV3 221 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 SAMD10Q9BYL1 202 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 MS4A6AQ9H2W1 248 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 C19orf73Q9NVV2 129 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 NAGKQ9UJ70 344 aa6.56□□□□□ -1.36
SMAD4-217ENST00000611848 IGKV3-7A0A075B6H7 116 aa6.55□□□□□ -1.36
SMAD4-217ENST00000611848 A0A1B0GW15 77 aa6.55□□□□□ -1.36
SMAD4-217ENST00000611848 RBAKDNA6NC62 111 aa6.55□□□□□ -1.36
SMAD4-217ENST00000611848 ZNF324O75467 553 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-217ENST00000611848 SCGB1D1O95968 90 aa6.55□□□□□ -1.36
SMAD4-217ENST00000611848 DEFB125Q8N687 156 aa6.55□□□□□ -1.36
SMAD4-217ENST00000611848 MRPL53Q96EL3 112 aaKnown RBP6.55□□□□□ -1.36
SMAD4-217ENST00000611848 ASCL2Q99929 193 aa6.55□□□□□ -1.36
SMAD4-217ENST00000611848 SSBP4Q9BWG4 385 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-217ENST00000611848 A0A1B0GUT8 65 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 SH2D1AO60880 128 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 HLA-DMBP28068 263 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 TFPI2P48307 235 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 RIGQ13278 110 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 FAM162BQ5T6X4 162 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 VGLL1Q99990 258 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 NDFIP1Q9BT67 221 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 PRO1933Q9H354 126 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 LOC102724200A0A096LPH7 203 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-217ENST00000611848 TRAV8-2A0A0B4J237 113 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 TMEM189A5PLL7 270 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-217ENST00000611848 K7EQG2 157 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-217ENST00000611848 PRB4P10163 310 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-217ENST00000611848 DDTP30046 118 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 AMTP48728 403 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 ODF3L2Q3SX64 289 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 IGFL4Q6B9Z1 124 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 TEX43Q6ZNM6 134 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 NIT1Q86X76 327 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 DCANP1Q8TF63 244 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 NRN1Q9NPD7 142 aa6.54□□□□□ -1.36
SMAD4-217ENST00000611848 PRAC2D3DTV9 90 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 ARMS2P0C7Q2 107 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 ZNF80P51504 273 aaPredicted RBP6.53□□□□□ -1.36
SMAD4-217ENST00000611848 RPS20P60866 119 aaKnown RBP6.53□□□□□ -1.36
SMAD4-217ENST00000611848 ZNF493Q6ZR52 646 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 ZNF575Q86XF7 245 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 Q8N976 141 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 URB1-AS1Q96HZ7 61 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 CLEC5AQ9NY25 188 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 AGRNO00468 2067 aa6.53□□□□□ -1.36
SMAD4-217ENST00000611848 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
SMAD4-217ENST00000611848 KIR2DL5BA0A0G2JN68 375 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 KIR2DL5BA0A0G2JPC4 375 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 PMCHP20382 165 aa6.52□□□□□ -1.37
SMAD4-217ENST00000611848 SAMD13Q5VXD3 122 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms