RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 OTOSQ8NHW6 89 aa1.44□□□□□ -2.18
SGMS1-207ENST00000602619 NAA60Q9H7X0 242 aa1.44□□□□□ -2.18
SGMS1-207ENST00000602619 LSM2Q9Y333 95 aaKnown RBP1.44□□□□□ -2.18
SGMS1-207ENST00000602619 COL1A1P02452 1464 aaPredicted RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ZNF638Q14966 1978 aaKnown RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ZNF407Q9C0G0 2248 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ANKARQ7Z5J8 1434 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 CLTCQ00610 1675 aaKnown RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 RIMS1Q86UR5 1692 aaKnown RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 TRAV10A0A0B4J240 114 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 LOC107984156A0A0G2JMH3 177 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 M0R2P5 195 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 CD2P06729 351 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 CXCL8P10145 99 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 BRS3P32247 399 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 TPPP2P59282 170 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 CASC2Q6XLA1 102 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ATP11AUNQ6ZP68 121 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ARL17AQ8IVW1 177 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 C8orf59Q8N0T1 100 aaPredicted RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 DPH3Q96FX2 82 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 NAA38Q9BRA0 125 aaKnown RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 COA4Q9NYJ1 87 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 BOKQ9UMX3 212 aaPredicted RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 AGLP35573 1532 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ALKQ9UM73 1620 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 THADAQ6YHU6 1953 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 SHROOM3Q8TF72 1996 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ARHGEF28Q8N1W1 1705 aaKnown RBP1.43□□□□□ -2.18
SGMS1-207ENST00000602619 IFT172Q9UG01 1749 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ECM29Q5VYK3 1845 aa1.43□□□□□ -2.18
SGMS1-207ENST00000602619 ZC3H13Q5T200 1668 aaKnown RBP1.42□□□□□ -2.18
SGMS1-207ENST00000602619 QRICH2Q9H0J4 1663 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 MAST2Q6P0Q8 1798 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 SLIT2O94813 1529 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 ZNF106Q9H2Y7 1883 aaKnown RBP1.42□□□□□ -2.18
SGMS1-207ENST00000602619 TRAV14DV4A0A0A6YYC5 116 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 A0A0D9SFI3 127 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 A0A1W2PNN7 141 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 TMEM218A2RU14 115 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 J3QLW9 94 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 M0R129 80 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 EDF1O60869 148 aaKnown RBP1.42□□□□□ -2.18
SGMS1-207ENST00000602619 Q6ZUT4 128 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 SNX29P2Q8IUI4 249 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 CLECL1Q8IZS7 167 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 TIMM21Q9BVV7 248 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 TAS2R8Q9NYW2 309 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 ZFP30Q9Y2G7 519 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 NOP16Q9Y3C1 178 aaKnown RBP1.42□□□□□ -2.18
SGMS1-207ENST00000602619 MRC1P22897 1456 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 NRKQ7Z2Y5 1582 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 PPLO60437 1756 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 KIDINS220Q9ULH0 1771 aa1.42□□□□□ -2.18
SGMS1-207ENST00000602619 DOCK4Q8N1I0 1966 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 SLIT1O75093 1534 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 CPS1P31327 1500 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 TMEM131LA2VDJ0 1609 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 TAF1LQ8IZX4 1826 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 PLXND1Q9Y4D7 1925 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 IGKV3D-11A0A0A0MRZ8 115 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 TRGV4A0A0C4DH28 118 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 LOC100130705A0A1B0GUX0 176 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 C2orf70A6NJV1 201 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 B4DSR2 109 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 C5orf67F2Z3F1 127 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 TNFP01375 233 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 GNG11P61952 73 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 PDE6HQ13956 83 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 DEFB113Q30KQ7 82 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 Q56UQ5 140 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 TEX261Q6UWH6 196 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 GKN2Q86XP6 184 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 LINC00269Q8N2A0 174 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 Q8N2B8 174 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 ACBD7Q8N6N7 88 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 PLPP5Q8NEB5 264 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 OR10AG1Q8NH19 301 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 SEC11CQ9BY50 192 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 IER3IP1Q9Y5U9 82 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 BCL9LQ86UU0 1499 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 CEP170BQ9Y4F5 1589 aaPredicted RBP1.41□□□□□ -2.18
SGMS1-207ENST00000602619 MROH2AA6NES4 1674 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 CACNA1SQ13698 1873 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 SEC16AO15027 2179 aa1.41□□□□□ -2.18
SGMS1-207ENST00000602619 KNDC1Q76NI1 1749 aa1.4□□□□□ -2.18
SGMS1-207ENST00000602619 ANKRD26Q9UPS8 1709 aa1.4□□□□□ -2.18
SGMS1-207ENST00000602619 DENND4CQ5VZ89 1909 aa1.4□□□□□ -2.18
SGMS1-207ENST00000602619 HIVEP2P31629 2446 aa1.4□□□□□ -2.18
SGMS1-207ENST00000602619 NUP210Q8TEM1 1887 aaPredicted RBP1.4□□□□□ -2.19
SGMS1-207ENST00000602619 DIP2CQ9Y2E4 1556 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 TRAV2A0A0B4J234 112 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 PIGBOS1A0A0B4J2F0 54 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 A0A0G2JQZ4 141 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 SDHAF1A6NFY7 115 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 H3BQF6 201 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 H3BRN7 92 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 APOC4-APOC2K7ER74 178 aa1.4□□□□□ -2.19
SGMS1-207ENST00000602619 IFNA17P01571 189 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms