RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 ZNF503Q96F45 646 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 DSCR8Q96T75 97 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 SIGLEC8Q9NYZ4 499 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 MGAQ8IWI9 3026 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 IGKV3-7A0A075B6H7 116 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 E7EUB6 86 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 IGF2BP2-AS1Q96M15 143 aa8.22□□□□□ -1.09
LIG1-220ENST00000601091 NDUFC2O95298 119 aa8.21□□□□□ -1.09
LIG1-220ENST00000601091 FGF6P10767 208 aa8.21□□□□□ -1.09
LIG1-220ENST00000601091 EEF1AKMT3Q96AZ1 226 aa8.21□□□□□ -1.09
LIG1-220ENST00000601091 ANKHD1Q8IWZ3 2542 aaKnown RBP8.21□□□□□ -1.09
LIG1-220ENST00000601091 NOTCH3Q9UM47 2321 aa8.21□□□□□ -1.09
LIG1-220ENST00000601091 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.09
LIG1-220ENST00000601091 ADAMTS20P59510 1910 aa8.21□□□□□ -1.09
LIG1-220ENST00000601091 KALRNO60229 2985 aa8.21□□□□□ -1.1
LIG1-220ENST00000601091 TRBV19A0A075B6N1 114 aa8.21□□□□□ -1.1
LIG1-220ENST00000601091 SPRY2O43597 315 aa8.21□□□□□ -1.1
LIG1-220ENST00000601091 TMEM14CQ9P0S9 112 aa8.21□□□□□ -1.1
LIG1-220ENST00000601091 TACC2O95359 2948 aa8.21□□□□□ -1.1
LIG1-220ENST00000601091 BDP1A6H8Y1 2624 aa8.21□□□□□ -1.1
LIG1-220ENST00000601091 IGHV3-49A0A0A0MS15 119 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 ARMS2P0C7Q2 107 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 LYZL1Q6UWQ5 148 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 Q6ZQT7 251 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 IGHV3-66A0A0C4DH42 116 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 LY6HO94772 140 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 SRD5A1P18405 259 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 PRR30Q53SZ7 412 aaPredicted RBP8.2□□□□□ -1.1
LIG1-220ENST00000601091 C10orf105Q8TEF2 133 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 DLX4Q92988 240 aaPredicted RBP8.2□□□□□ -1.1
LIG1-220ENST00000601091 CREBBPQ92793 2442 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 HBDP02042 147 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 THBDP07204 575 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 C15orf53Q8NAA6 179 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 IGKV2-40A0A087WW87 121 aaPredicted RBP8.2□□□□□ -1.1
LIG1-220ENST00000601091 D6R8Y8 96 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 M0R1W7 72 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 IGKV2D-40P01614 121 aaPredicted RBP8.2□□□□□ -1.1
LIG1-220ENST00000601091 PDE6HQ13956 83 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 WFDC3Q8IUB2 231 aa8.2□□□□□ -1.1
LIG1-220ENST00000601091 F5H697 171 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 LTAP01374 205 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 PSMB2P49721 201 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 CLEC19AQ6UXS0 136 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 PRORYQ9H606 182 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 PMAIP1Q13794 54 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 KLF5Q13887 457 aaPredicted RBP8.19□□□□□ -1.1
LIG1-220ENST00000601091 ZC2HC1BQ5TFG8 222 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 EBLN2Q6P2I7 272 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 TMEM75Q8N9X5 138 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 RITA1Q96K30 269 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 LINC01587Q99440 93 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 MRPL36Q9P0J6 103 aaKnown RBP8.19□□□□□ -1.1
LIG1-220ENST00000601091 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
LIG1-220ENST00000601091 LINC01620Q4KN68 170 aa8.19□□□□□ -1.1
LIG1-220ENST00000601091 ADGRG4Q8IZF6 3080 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 SHISA9B4DS77 424 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 HAX1O00165 279 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 C22orf34Q6ZV56 151 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 IFI27L1Q96BM0 104 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 SLC50A1Q9BRV3 221 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.18□□□□□ -1.11e-7■■■■□ 22.1
LIG1-220ENST00000601091 IGLV2-23P01705 113 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 IGLV2-8P01709 118 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 MGPP08493 103 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 CACNG7P62955 275 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 MINOS1Q5TGZ0 78 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 RASL10AQ92737 203 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 MINOS1-NBL1R4GNA1 71 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 SH2D1AO60880 128 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 DPM2O94777 84 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 BCL6BQ8N143 479 aaPredicted RBP8.18□□□□□ -1.1
LIG1-220ENST00000601091 DSCAML1Q8TD84 2053 aa8.18□□□□□ -1.1
LIG1-220ENST00000601091 C15orf32Q32M92 178 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 ANKRD29Q8N6D5 301 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 ZMAT4Q9H898 229 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 LAMA5O15230 3695 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 IGHV1-24A0A0C4DH33 117 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 RBAKDNA6NC62 111 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 GP9P14770 177 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 AMN1Q8IY45 258 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 PRSS33Q8NF86 280 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 TRAV2A0A0B4J234 112 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 J3QQQ9 107 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 CD7P09564 240 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 LCNL1Q6ZST4 164 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
LIG1-220ENST00000601091 PHLDA3Q9Y5J5 127 aa8.17□□□□□ -1.1
LIG1-220ENST00000601091 IGKV1D-37A0A075B6S9 117 aa8.16□□□□□ -1.1
LIG1-220ENST00000601091 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
LIG1-220ENST00000601091 H3BRN7 92 aa8.16□□□□□ -1.1
LIG1-220ENST00000601091 RPS28P62857 69 aaKnown RBP8.16□□□□□ -1.1
LIG1-220ENST00000601091 C3orf22Q8N5N4 141 aa8.16□□□□□ -1.1
LIG1-220ENST00000601091 ZNF491Q8N8L2 437 aa8.16□□□□□ -1.1
LIG1-220ENST00000601091 Q8TAT8 98 aa8.16□□□□□ -1.1
LIG1-220ENST00000601091 PYGO1Q9Y3Y4 419 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms