RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 C9JCJ5 164 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 ZNF415Q09FC8 603 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 TDRG1Q3Y452 100 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 IBA57Q5T440 356 aaKnown RBP12.01□□□□□ -0.49
USHBP1-210ENST00000600286 PRR27Q6MZM9 219 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 SMIM7Q9BQ49 75 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 MLST8Q9BVC4 326 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 EDA2RQ9HAV5 297 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 SH2D1AO60880 128 aa12□□□□□ -0.49
USHBP1-210ENST00000600286 PRM2P04554 102 aa12□□□□□ -0.49
USHBP1-210ENST00000600286 S100A4P26447 101 aaKnown RBP12□□□□□ -0.49
USHBP1-210ENST00000600286 RNASE8Q8TDE3 154 aaKnown RBP12□□□□□ -0.49
USHBP1-210ENST00000600286 STAB2Q8WWQ8 2551 aa12□□□□□ -0.49
USHBP1-210ENST00000600286 DYNC2H1Q8NCM8 4307 aaKnown RBP11.99□□□□□ -0.49
USHBP1-210ENST00000600286 B4DEV8 164 aa11.99□□□□□ -0.49
USHBP1-210ENST00000600286 OR5I1Q13606 314 aa11.99□□□□□ -0.49
USHBP1-210ENST00000600286 SOHLH1Q5JUK2 328 aa11.99□□□□□ -0.49
USHBP1-210ENST00000600286 Q6ZQT7 251 aa11.99□□□□□ -0.49
USHBP1-210ENST00000600286 NOP10Q9NPE3 64 aaKnown RBP11.99□□□□□ -0.49
USHBP1-210ENST00000600286 FAM222AQ5U5X8 452 aa11.98□□□□□ -0.49
USHBP1-210ENST00000600286 SPXQ9BT56 116 aa11.98□□□□□ -0.49
USHBP1-210ENST00000600286 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
USHBP1-210ENST00000600286 DKK2Q9UBU2 259 aa11.98□□□□□ -0.49
USHBP1-210ENST00000600286 LY96Q9Y6Y9 160 aa11.98□□□□□ -0.49
USHBP1-210ENST00000600286 GNRH2O43555 120 aa11.97□□□□□ -0.49
USHBP1-210ENST00000600286 ASIPP42127 132 aa11.97□□□□□ -0.49
USHBP1-210ENST00000600286 CRIP1P50238 77 aa11.97□□□□□ -0.49
USHBP1-210ENST00000600286 DAD1P61803 113 aa11.97□□□□□ -0.49
USHBP1-210ENST00000600286 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
USHBP1-210ENST00000600286 TMEM241Q24JQ0 296 aa11.97□□□□□ -0.49
USHBP1-210ENST00000600286 TP53TG3Q9ULZ0 132 aa11.97□□□□□ -0.49
USHBP1-210ENST00000600286 XKRY2A2RUG3 117 aa11.96□□□□□ -0.49
USHBP1-210ENST00000600286 M0R036 132 aa11.96□□□□□ -0.49
USHBP1-210ENST00000600286 TCL1AP56279 114 aa11.96□□□□□ -0.49
USHBP1-210ENST00000600286 SRSF3P84103 164 aaKnown RBP11.96□□□□□ -0.49
USHBP1-210ENST00000600286 UQCC3Q6UW78 93 aa11.96□□□□□ -0.49
USHBP1-210ENST00000600286 OCC1Q8TAD7 63 aa11.96□□□□□ -0.49
USHBP1-210ENST00000600286 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 KRBOX1C9JBD0 128 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 IGLV2-8P01709 118 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 P01737 135 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 TYMSP04818 313 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 DEFB130BP0DP73 79 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 DEFB130AP0DP74 79 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 RPS20P60866 119 aaKnown RBP11.95□□□□□ -0.5
USHBP1-210ENST00000600286 LINC01559Q495D7 138 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 MDFICQ9P1T7 246 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 C11orf21Q9P2W6 132 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 SACSQ9NZJ4 4579 aa11.95□□□□□ -0.5
USHBP1-210ENST00000600286 TRGV1A0A0A0MS02 117 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 IGHV3-16A0A0C4DH30 117 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 PGPEP1LA6NFU8 196 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 NANOS2P60321 138 aaKnown RBP11.94□□□□□ -0.5
USHBP1-210ENST00000600286 LGALS9BQ3B8N2 356 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 MUC7Q8TAX7 377 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 NAT8Q9UHE5 227 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
USHBP1-210ENST00000600286 TMSB15BA0A087X1C1 80 aa11.93□□□□□ -0.5
USHBP1-210ENST00000600286 IGKV3D-20A0A0C4DH25 116 aa11.93□□□□□ -0.5
USHBP1-210ENST00000600286 PLAC8L1A1L4L8 177 aa11.93□□□□□ -0.5
USHBP1-210ENST00000600286 LYSTQ99698 3801 aa11.93□□□□□ -0.5
USHBP1-210ENST00000600286 CELA1Q9UNI1 258 aa11.93□□□□□ -0.5
USHBP1-210ENST00000600286 RYR2Q92736 4967 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 TRGV2A0A075B6R0 118 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 GAGE12BA1L429 117 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 C9JQL5 133 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 M0R2P5 195 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 GAGE7O76087 117 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 SFTA3P0C7M3 94 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 GAGE12FP0CL80 117 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 GAGE12GP0CL81 117 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 GAGE12IP0CL82 117 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 C12orf74Q32Q52 190 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 COMMD7Q86VX2 200 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 OR2D3Q8NGH3 330 aa11.92□□□□□ -0.5
USHBP1-210ENST00000600286 TRAV10A0A0B4J240 114 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 LINC00862A6NCI5 91 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 C3orf84H3BNL1 204 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 SPINK4O60575 86 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 CXCL1P09341 107 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 ERVFC1-1P60608 527 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 SYT8Q8NBV8 401 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 NUDT10Q8NFP7 164 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 STARD9Q9P2P6 4700 aa11.91□□□□□ -0.5
USHBP1-210ENST00000600286 C19orf71A6NCJ1 209 aa11.9□□□□□ -0.5
USHBP1-210ENST00000600286 GATCO43716 136 aaKnown RBP11.9□□□□□ -0.5
USHBP1-210ENST00000600286 ATP5G1P05496 136 aa11.9□□□□□ -0.5
USHBP1-210ENST00000600286 ADIRFQ15847 76 aa11.9□□□□□ -0.5
USHBP1-210ENST00000600286 DNLZQ5SXM8 178 aa11.9□□□□□ -0.5
USHBP1-210ENST00000600286 LINC01551Q86U37 167 aa11.9□□□□□ -0.5
USHBP1-210ENST00000600286 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-210ENST00000600286 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
USHBP1-210ENST00000600286 KLK5Q9Y337 293 aaPredicted RBP11.9□□□□□ -0.5
USHBP1-210ENST00000600286 PHLDA3Q9Y5J5 127 aa11.9□□□□□ -0.5
USHBP1-210ENST00000600286 NUPR2A6NF83 97 aa11.89□□□□□ -0.51
USHBP1-210ENST00000600286 K7EN84 100 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms