RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 TIMM8BQ9Y5J9 83 aaPredicted RBP7.28□□□□□ -1.24
LIG1-213ENST00000596672 GAGE12BA1L429 117 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 KLLNB2CW77 178 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 ZNF253O75346 499 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 GAGE7O76087 117 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 NUDT3O95989 172 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 MT-ND4LP03901 98 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 S100A8P05109 93 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 ATP5G1P05496 136 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 SRP19P09132 144 aaKnown RBP7.27□□□□□ -1.25
LIG1-213ENST00000596672 OR10J4P0C629 311 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 GAGE12FP0CL80 117 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 GAGE12GP0CL81 117 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 GAGE12IP0CL82 117 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 ATP5G3P48201 142 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 TNP2Q05952 138 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 KHDC3LQ587J8 217 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 CST9LP1Q5W188 147 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 UBE2DNLQ8IWF7 75 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 OR10J6PQ8NGY7 276 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 BLNKQ8WV28 456 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 C16orf74Q96GX8 76 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 VSIG2Q96IQ7 327 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 ODF3Q96PU9 254 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 TCEAL7Q9BRU2 100 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 PAXXQ9BUH6 204 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 OR51M1Q9H341 326 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
LIG1-213ENST00000596672 PQLC2Q6ZP29 291 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 ZNF493Q6ZR52 646 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 CBLN2Q8IUK8 224 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 C15orf53Q8NAA6 179 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 C20orf144Q9BQM9 153 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 GSN-AS1Q9NRJ2 163 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 TMEM167BQ9NRX6 74 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 KLF12Q9Y4X4 402 aa7.26□□□□□ -1.25
LIG1-213ENST00000596672 TRAV26-1A0A087WT03 109 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 A0A0J9YY99 117 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 NBDYA0A0U1RRE5 68 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 C7orf71A4D174 169 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 COLCA2A8K830 154 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 S100A9P06702 114 aaKnown RBP7.25□□□□□ -1.25
LIG1-213ENST00000596672 S100A6P06703 90 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 NBEAP1P0C6P0 100 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 CRISP2P16562 243 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 UBE2L3P68036 154 aaKnown RBP7.25□□□□□ -1.25
LIG1-213ENST00000596672 ESRGQ1W209 222 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 C9orf47Q6ZRZ4 202 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 S100A7AQ86SG5 101 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 CYB561D1Q8N8Q1 229 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 Q8TAT8 98 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 MRPL53Q96EL3 112 aaKnown RBP7.25□□□□□ -1.25
LIG1-213ENST00000596672 RPS10P5Q9NQ39 176 aa7.25□□□□□ -1.25
LIG1-213ENST00000596672 RNASE4P34096 147 aaKnown RBP7.24□□□□□ -1.25
LIG1-213ENST00000596672 TAGLN2P37802 199 aaKnown RBP7.24□□□□□ -1.25
LIG1-213ENST00000596672 LEPP41159 167 aa7.24□□□□□ -1.25
LIG1-213ENST00000596672 AKR1D1P51857 326 aa7.24□□□□□ -1.25
LIG1-213ENST00000596672 MEF2BQ02080 365 aaPredicted RBP7.24□□□□□ -1.25
LIG1-213ENST00000596672 DAZ2Q13117 558 aaKnown RBP7.24□□□□□ -1.25
LIG1-213ENST00000596672 OR5I1Q13606 314 aa7.24□□□□□ -1.25
LIG1-213ENST00000596672 SOHLH1Q5JUK2 328 aa7.24□□□□□ -1.25
LIG1-213ENST00000596672 RNF24Q9Y225 148 aa7.24□□□□□ -1.25
LIG1-213ENST00000596672 M0R036 132 aa7.23□□□□□ -1.25
LIG1-213ENST00000596672 SLC25A5P05141 298 aaKnown RBP7.23□□□□□ -1.25
LIG1-213ENST00000596672 PDE6HQ13956 83 aa7.23□□□□□ -1.25
LIG1-213ENST00000596672 C1orf134Q5TEV5 83 aa7.23□□□□□ -1.25
LIG1-213ENST00000596672 PYGO2Q9BRQ0 406 aa7.23□□□□□ -1.25
LIG1-213ENST00000596672 LINC00467Q9BRT7 94 aa7.23□□□□□ -1.25
LIG1-213ENST00000596672 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
LIG1-213ENST00000596672 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
LIG1-213ENST00000596672 A0A087WWC5 75 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 A0A096LPF7 62 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 C7orf77A4D0Y5 90 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 SPINK4O60575 86 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 SMIM6P0DI80 62 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 RPL35P42766 123 aaKnown RBP7.22□□□□□ -1.25
LIG1-213ENST00000596672 RANP62826 216 aaKnown RBP7.22□□□□□ -1.25
LIG1-213ENST00000596672 SUMO1P63165 101 aaKnown RBP7.22□□□□□ -1.25
LIG1-213ENST00000596672 ZNF674Q2M3X9 581 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 ANXA2RQ3ZCQ2 193 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 HIST1H2BAQ96A08 127 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 TVP23CQ96ET8 276 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 LINC00477Q96M19 166 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 C12orf57Q99622 126 aa7.22□□□□□ -1.25
LIG1-213ENST00000596672 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.26
LIG1-213ENST00000596672 A0A1W2PRE2 83 aa7.21□□□□□ -1.26
LIG1-213ENST00000596672 B4DEV8 164 aa7.21□□□□□ -1.26
LIG1-213ENST00000596672 F6UZH7 168 aa7.21□□□□□ -1.26
LIG1-213ENST00000596672 PDE6DO43924 150 aa7.21□□□□□ -1.26
LIG1-213ENST00000596672 TCL1AP56279 114 aa7.21□□□□□ -1.26
LIG1-213ENST00000596672 FAM3BP58499 235 aaPredicted RBP7.21□□□□□ -1.26
LIG1-213ENST00000596672 ATG101Q9BSB4 218 aa7.21□□□□□ -1.26
LIG1-213ENST00000596672 MRPL16Q9NX20 251 aaKnown RBP7.21□□□□□ -1.26
LIG1-213ENST00000596672 PGPA6NDG6 321 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 C5orf52A6NGY3 159 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 ZNF727A8MUV8 499 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 SNURFLB1AK76 121 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 GGTLC3B5MD39 225 aa7.2□□□□□ -1.26
LIG1-213ENST00000596672 TMEM250H0YL14 139 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms