RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 LINC01587Q99440 93 aa13.94□□□□□ -0.18
PNKP-207ENST00000596014 C20orf144Q9BQM9 153 aa13.94□□□□□ -0.18
PNKP-207ENST00000596014 LENEPQ9Y5L5 61 aa13.94□□□□□ -0.18
PNKP-207ENST00000596014 TRAV12-3A0A0B4J271 114 aa13.93□□□□□ -0.18
PNKP-207ENST00000596014 KCNIP4Q6PIL6 250 aa13.93□□□□□ -0.18
PNKP-207ENST00000596014 TMEM256Q8N2U0 113 aa13.93□□□□□ -0.18
PNKP-207ENST00000596014 C11orf68Q9H3H3 251 aaKnown RBP13.93□□□□□ -0.18
PNKP-207ENST00000596014 RNASE4P34096 147 aaKnown RBP13.92□□□□□ -0.18
PNKP-207ENST00000596014 OR10G8Q8NGN5 311 aa13.92□□□□□ -0.18
PNKP-207ENST00000596014 A0A1W2PPQ1 181 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 C7orf71A4D174 169 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 IGLV2-11P01706 119 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 PRM2P04554 102 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 S100A6P06703 90 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 PRR9Q5T870 116 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 TMEM75Q8N9X5 138 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 LINC00479Q96M42 142 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 IMMP2LQ96T52 175 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 ZNF705GA8MUZ8 300 aaPredicted RBP13.91□□□□□ -0.18
PNKP-207ENST00000596014 TAS2R60P59551 318 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 RRN3P1Q2M238 152 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 PSG8Q9UQ74 426 aa13.91□□□□□ -0.18
PNKP-207ENST00000596014 ZNF324O75467 553 aaPredicted RBP13.9□□□□□ -0.18
PNKP-207ENST00000596014 TRAV34A0A0B4J273 112 aa13.89□□□□□ -0.19
PNKP-207ENST00000596014 FBLL1A6NHQ2 334 aaKnown RBP13.89□□□□□ -0.19
PNKP-207ENST00000596014 IGLV2-8P01709 118 aa13.89□□□□□ -0.19
PNKP-207ENST00000596014 HTN1P15515 57 aa13.89□□□□□ -0.19
PNKP-207ENST00000596014 CSMD3Q7Z407 3707 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 C5orf52A6NGY3 159 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 TRGC2P03986 189 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 TYMSP04818 313 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 PRNTQ86SH4 94 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 GCGP01275 180 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 AZU1P20160 251 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 SNRPEP62304 92 aaKnown RBP13.88□□□□□ -0.19
PNKP-207ENST00000596014 SMUG1Q53HV7 270 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 Q6ZQT7 251 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 IL17DQ8TAD2 202 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 BTF3L4Q96K17 158 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 NDFIP1Q9BT67 221 aa13.88□□□□□ -0.19
PNKP-207ENST00000596014 TMEM189A5PLL7 270 aa13.87□□□□□ -0.19
PNKP-207ENST00000596014 EMP1P54849 157 aa13.87□□□□□ -0.19
PNKP-207ENST00000596014 OR5I1Q13606 314 aa13.87□□□□□ -0.19
PNKP-207ENST00000596014 TMEM183BQ1AE95 376 aa13.87□□□□□ -0.19
PNKP-207ENST00000596014 IL36BQ9NZH7 164 aa13.87□□□□□ -0.19
PNKP-207ENST00000596014 KLF12Q9Y4X4 402 aa13.87□□□□□ -0.19
PNKP-207ENST00000596014 FAM3BP58499 235 aaPredicted RBP13.86□□□□□ -0.19
PNKP-207ENST00000596014 ERVFC1-1P60608 527 aa13.86□□□□□ -0.19
PNKP-207ENST00000596014 MUC7Q8TAX7 377 aa13.86□□□□□ -0.19
PNKP-207ENST00000596014 OSTCQ9NRP0 149 aa13.86□□□□□ -0.19
PNKP-207ENST00000596014 V9GYV3 84 aa13.86□□□□□ -0.19
PNKP-207ENST00000596014 PHOX2AO14813 284 aa13.85□□□□□ -0.19
PNKP-207ENST00000596014 MGST1P10620 155 aaKnown RBP13.85□□□□□ -0.19
PNKP-207ENST00000596014 UBE2G1P62253 170 aa13.85□□□□□ -0.19
PNKP-207ENST00000596014 SAPCD1Q5SSQ6 148 aa13.85□□□□□ -0.19
PNKP-207ENST00000596014 Q6AWC8 147 aa13.85□□□□□ -0.19
PNKP-207ENST00000596014 C11orf45Q8TAV5 145 aa13.85□□□□□ -0.19
PNKP-207ENST00000596014 FMC1Q96HJ9 113 aa13.85□□□□□ -0.19
PNKP-207ENST00000596014 C8orf49Q96NF6 230 aa13.85□□□□□ -0.19
PNKP-207ENST00000596014 TRAV9-1A0A075B6T8 112 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BKO60814 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BJP06899 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BOP23527 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BBP33778 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BDP58876 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BCP62807 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 FABP9Q0Z7S8 132 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST2H2BEQ16778 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.84□□□□□ -0.19
PNKP-207ENST00000596014 ZNF493Q6ZR52 646 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 Q86TA4 180 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 NHLRC2Q8NBF2 726 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 FRZBQ92765 325 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BHQ93079 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BNQ99877 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 HIST1H2BMQ99879 126 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 LINC00467Q9BRT7 94 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 RNASE7Q9H1E1 156 aaKnown RBP13.84□□□□□ -0.19
PNKP-207ENST00000596014 CELA1Q9UNI1 258 aa13.84□□□□□ -0.19
PNKP-207ENST00000596014 S100A9P06702 114 aaKnown RBP13.83□□□□□ -0.2
PNKP-207ENST00000596014 TRGC1P0CF51 173 aa13.83□□□□□ -0.2
PNKP-207ENST00000596014 AKR1D1P51857 326 aa13.83□□□□□ -0.2
PNKP-207ENST00000596014 RNASE8Q8TDE3 154 aaKnown RBP13.83□□□□□ -0.2
PNKP-207ENST00000596014 TMEM263Q8WUH6 116 aaKnown RBP13.83□□□□□ -0.2
PNKP-207ENST00000596014 SMIM12Q96EX1 92 aa13.83□□□□□ -0.2
PNKP-207ENST00000596014 C16orf74Q96GX8 76 aa13.83□□□□□ -0.2
PNKP-207ENST00000596014 TRBV6-1A0A0K0K1D8 114 aa13.82□□□□□ -0.2
PNKP-207ENST00000596014 PLAC8L1A1L4L8 177 aa13.82□□□□□ -0.2
PNKP-207ENST00000596014 NANOS2P60321 138 aaKnown RBP13.82□□□□□ -0.2
PNKP-207ENST00000596014 IBA57Q5T440 356 aaKnown RBP13.82□□□□□ -0.2
PNKP-207ENST00000596014 BAGE2Q86Y30 109 aa13.82□□□□□ -0.2
PNKP-207ENST00000596014 ZFP30Q9Y2G7 519 aa13.82□□□□□ -0.2
PNKP-207ENST00000596014 IGHV1OR15-1A0A075B7D0 117 aa13.82□□□□□ -0.2
PNKP-207ENST00000596014 SPART-AS1P0CW21 52 aa13.82□□□□□ -0.2
PNKP-207ENST00000596014 ZNF80P51504 273 aaPredicted RBP13.82□□□□□ -0.2
PNKP-207ENST00000596014 DKK2Q9UBU2 259 aa13.82□□□□□ -0.2
PNKP-207ENST00000596014 TRAV21A0A0B4J279 112 aa13.81□□□□□ -0.2
PNKP-207ENST00000596014 CBY3A6NI87 242 aa13.81□□□□□ -0.2
PNKP-207ENST00000596014 C3orf84H3BNL1 204 aa13.81□□□□□ -0.2
PNKP-207ENST00000596014 NDUFA6P56556 154 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms