RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 NUP35Q8NFH5 326 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 PHLDA1Q8WV24 401 aaPredicted RBP9.45□□□□□ -0.9
SCAF1-202ENST00000595242 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
SCAF1-202ENST00000595242 MRPL18Q9H0U6 180 aaKnown RBP9.45□□□□□ -0.9
SCAF1-202ENST00000595242 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 PEF1Q9UBV8 284 aaKnown RBP9.45□□□□□ -0.9
SCAF1-202ENST00000595242 HERC1Q15751 4861 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 HSPG2P98160 4391 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 DNAH11Q96DT5 4516 aa9.44□□□□□ -0.9
SCAF1-202ENST00000595242 IGKV2-40A0A087WW87 121 aaPredicted RBP9.44□□□□□ -0.9
SCAF1-202ENST00000595242 SNURFLB1AK76 121 aa9.44□□□□□ -0.9
SCAF1-202ENST00000595242 IGKV2D-40P01614 121 aaPredicted RBP9.44□□□□□ -0.9
SCAF1-202ENST00000595242 CD300EQ496F6 205 aaPredicted RBP9.44□□□□□ -0.9
SCAF1-202ENST00000595242 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 XKRY2A2RUG3 117 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 HIGD1CA8MV81 97 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 SOCS3O14543 225 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 ZNF207O43670 478 aaKnown RBP9.43□□□□□ -0.9
SCAF1-202ENST00000595242 HLA-DMBP28068 263 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 CRIP1P50238 77 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 RBPMS2Q6ZRY4 209 aaKnown RBP9.43□□□□□ -0.9
SCAF1-202ENST00000595242 WFDC3Q8IUB2 231 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 GTSF1Q8WW33 167 aa9.43□□□□□ -0.9
SCAF1-202ENST00000595242 DAZ1Q9NQZ3 744 aaKnown RBP9.43□□□□□ -0.9
SCAF1-202ENST00000595242 IGHV3-66A0A0C4DH42 116 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 A8MWP6 167 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 GFI1BQ5VTD9 330 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 Q6AWC8 147 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 MRPL54Q6P161 138 aaKnown RBP9.42□□□□□ -0.9
SCAF1-202ENST00000595242 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 OR2D3Q8NGH3 330 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 C8orf49Q96NF6 230 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 PEMTQ9UBM1 199 aa9.42□□□□□ -0.9
SCAF1-202ENST00000595242 IGHV3OR16-13A0A075B7E8 117 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 IGHV3-74A0A0B4J1X5 117 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 LGALS9O00182 355 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 ESDP10768 282 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 BMI1P35226 326 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 Q0VG73 95 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 SAMD13Q5VXD3 122 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 C9orf47Q6ZRZ4 202 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 VGLL1Q99990 258 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 SMPXQ9UHP9 88 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
SCAF1-202ENST00000595242 LOC102724200A0A096LPH7 203 aaPredicted RBP9.4□□□□□ -0.9
SCAF1-202ENST00000595242 IGHV3-49A0A0A0MS15 119 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
SCAF1-202ENST00000595242 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 SH2D1AO60880 128 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 S100A2P29034 98 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 HBBP68871 147 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 LENEPQ9Y5L5 61 aa9.4□□□□□ -0.9
SCAF1-202ENST00000595242 A0A1B0GW15 77 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 SPRY2O43597 315 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 SPINK4O60575 86 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 CRISP2P16562 243 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
SCAF1-202ENST00000595242 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 DNLZQ5SXM8 178 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 GDF5OSQ5U4N7 250 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 RNF182Q8N6D2 247 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 C16orf92Q96LL3 132 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 C12orf57Q99622 126 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 NRN1Q9NPD7 142 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 TP53TG3Q9ULZ0 132 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 TP53TG1Q9Y2A0 90 aa9.39□□□□□ -0.91
SCAF1-202ENST00000595242 APCSP02743 223 aa9.38□□□□□ -0.91
SCAF1-202ENST00000595242 AMBPP02760 352 aa9.38□□□□□ -0.91
SCAF1-202ENST00000595242 ZNF138P52744 262 aa9.38□□□□□ -0.91
SCAF1-202ENST00000595242 Q6ZWC4 215 aa9.38□□□□□ -0.91
SCAF1-202ENST00000595242 Q8TAT8 98 aa9.38□□□□□ -0.91
SCAF1-202ENST00000595242 DYNLRB2Q8TF09 96 aa9.38□□□□□ -0.91
SCAF1-202ENST00000595242 AGPAT4-IT1Q9H0P7 198 aa9.38□□□□□ -0.91
SCAF1-202ENST00000595242 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 TMEM189A5PLL7 270 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 PRSS29PA6NIE9 313 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
SCAF1-202ENST00000595242 LINC00310P59036 64 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 SLAQ13239 276 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 TMEM78Q5T7P6 136 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 RNF183Q96D59 192 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
SCAF1-202ENST00000595242 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
SCAF1-202ENST00000595242 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms