RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 Q8TAT8 98 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 GEMIN7Q9H840 131 aaKnown RBP2.77□□□□□ -1.97
VMP1-216ENST00000592790 ZNRD1Q9P1U0 126 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 MED12LQ86YW9 2145 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 HCFC1P51610 2035 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 ARHGAP21Q5T5U3 1957 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 NAV2Q8IVL1 2488 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 TRAV41A0A0B4J266 112 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 CGB1A6NKQ9 187 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 TNFRSF13BO14836 293 aaPredicted RBP2.77□□□□□ -1.97
VMP1-216ENST00000592790 IGLC6P0CF74 106 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 CD24P25063 80 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 UBE2E1P51965 193 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 KLRD1Q13241 179 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 PCP2Q8IVA1 136 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 RAX2Q96IS3 184 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 NAA38Q9BRA0 125 aaKnown RBP2.77□□□□□ -1.97
VMP1-216ENST00000592790 OVOL2Q9BRP0 275 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 RNF114Q9Y508 228 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 AHCTF1Q8WYP5 2266 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 TEX48A0A1B0GUV7 120 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 F8WDY8 70 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 IGHV3-23P01764 117 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 ZNF688P0C7X2 276 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 HOXB4P17483 251 aaPredicted RBP2.77□□□□□ -1.97
VMP1-216ENST00000592790 CNTFRP26992 372 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 RNASE4P34096 147 aaKnown RBP2.77□□□□□ -1.97
VMP1-216ENST00000592790 RHOHQ15669 191 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 ETDBQ3ZM63 59 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 LCNL1Q6ZST4 164 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 COX8CQ7Z4L0 72 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 TRPT1Q86TN4 253 aaKnown RBP2.77□□□□□ -1.97
VMP1-216ENST00000592790 E9PLD3 99 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 NDUFA4O00483 81 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 NPFFO15130 113 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 PRSS2P07478 247 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 KLRB1Q12918 225 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 SHISA2Q6UWI4 295 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 C9orf47Q6ZRZ4 202 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 C2orf91Q6ZV80 131 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 PIP4P1Q86T03 277 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 PRADC1Q9BSG0 188 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 CTSZQ9UBR2 303 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 PRO1854Q9UHT4 67 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 S4R3C0 116 aa2.77□□□□□ -1.97
VMP1-216ENST00000592790 FREM1Q5H8C1 2179 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 DIAPH2-AS1Q14236 149 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 UFSP1Q6NVU6 142 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 LINC00322Q6ZN03 302 aaPredicted RBP2.76□□□□□ -1.97
VMP1-216ENST00000592790 IL17RELQ6ZVW7 336 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 TOMM6Q96B49 74 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 CNFNQ9BYD5 112 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 CUL9Q8IWT3 2517 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 SAP30O75446 220 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 IGLV2-11P01706 119 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 PPIFP30405 207 aaKnown RBP2.76□□□□□ -1.97
VMP1-216ENST00000592790 C1orf229Q6ZS94 237 aaPredicted RBP2.76□□□□□ -1.97
VMP1-216ENST00000592790 TEN1Q86WV5 123 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 UBTD1Q9HAC8 227 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 MRPL36Q9P0J6 103 aaKnown RBP2.76□□□□□ -1.97
VMP1-216ENST00000592790 TLN2Q9Y4G6 2542 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 E7EUB6 86 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 CD7P09564 240 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 EFNA4P52798 201 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 FXYD2P54710 66 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 FXYD7P58549 80 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 C10orf126Q8N4M7 172 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 LINC01560Q8TB33 94 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 MYO18BQ8IUG5 2567 aa2.76□□□□□ -1.97
VMP1-216ENST00000592790 RIF1Q5UIP0 2472 aaKnown RBP2.75□□□□□ -1.97
VMP1-216ENST00000592790 TRAV25A0A0B4J276 109 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 IGHV3-35A0A0C4DH35 117 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 H3BS24 57 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 H7C2G1 150 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 ACYP1P07311 99 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 ERCC8Q13216 396 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 SPRNQ5BIV9 151 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 FAM74A4Q5TZK3 123 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 MORN3Q6PF18 240 aaPredicted RBP2.75□□□□□ -1.97
VMP1-216ENST00000592790 C14orf178Q8N769 122 aaPredicted RBP2.75□□□□□ -1.97
VMP1-216ENST00000592790 URB1-AS1Q96HZ7 61 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 C17orf77Q96MU5 243 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 TIMM17AQ99595 171 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 DOCK10Q96BY6 2186 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 BUB3O43684 328 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 COL8A2P25067 703 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 RPL32P62910 135 aaKnown RBP2.75□□□□□ -1.97
VMP1-216ENST00000592790 FOXI1Q12951 378 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 MSMPQ1L6U9 139 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 SEM1Q6ZVN7 128 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 DYNAPQ8N1N2 210 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 LY6G5BQ8NDX9 201 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 JMJD8Q96S16 334 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 AGPAT4-IT1Q9H0P7 198 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 TP53TG1Q9Y2A0 90 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 DYSFO75923 2080 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 ICE1Q9Y2F5 2266 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 TRAV2A0A0B4J234 112 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 IGHV3-66A0A0C4DH42 116 aa2.75□□□□□ -1.97
VMP1-216ENST00000592790 H3BMM0 161 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms