RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 Q6ZSA8 131 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 RAB24Q969Q5 203 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 PYGO2Q9BRQ0 406 aa8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 MRPL16Q9NX20 251 aaKnown RBP8.52□□□□□ -1.05
PRKCSH-210ENST00000589990 LRP2P98164 4655 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 SPINK4O60575 86 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 TPT1P13693 172 aaKnown RBP8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 EVI2AP22794 236 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 FHL2Q14192 279 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 WFDC2Q14508 124 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 NEGR1Q7Z3B1 354 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 C9orf62Q8N4C0 152 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 FXYD5Q96DB9 178 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 SAT2Q96F10 170 aaPredicted RBP8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 SLC50A1Q9BRV3 221 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 PRO0255Q9UI72 69 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 TP53TG3Q9ULZ0 132 aa8.51□□□□□ -1.05
PRKCSH-210ENST00000589990 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 TRBV19A0A075B6N1 114 aa8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 K7EQD1 137 aa8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 SEC11BP0C7V7 166 aa8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 NKX2-5P52952 324 aaPredicted RBP8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 MRPL23Q16540 153 aaKnown RBP8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 HHLA3Q9XRX5 114 aa8.5□□□□□ -1.05
PRKCSH-210ENST00000589990 PSCAO43653 123 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 STAG3L2P0CL84 134 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 TCL1AP56279 114 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 RANP62826 216 aaKnown RBP8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 BTN1A1Q13410 526 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 PDE6HQ13956 83 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 EIF5AL1Q6IS14 154 aaKnown RBP8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 PQLC2Q6ZP29 291 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 SLC51BQ86UW2 128 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 IQCF2Q8IXL9 164 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 TMED6Q8WW62 240 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 AAMDCQ9H7C9 122 aa8.49□□□□□ -1.05
PRKCSH-210ENST00000589990 CTXND1A0A1B0GTU2 59 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 UMAD1C9J7I0 102 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 ZNF253O75346 499 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 NDUFB4O95168 129 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 CXorf1O96002 111 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 OXTP01178 125 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 SFTA3P0C7M3 94 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 ARL14EPLP0DKL9 152 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 LEPP41159 167 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 ZNF415Q09FC8 603 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 ERCC8Q13216 396 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 SCXQ7RTU7 201 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 EXOC3-AS1Q8N2X6 119 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 ZNF680Q8NEM1 530 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 STOML3Q8TAV4 291 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 Q9HAA7 133 aa8.48□□□□□ -1.05
PRKCSH-210ENST00000589990 C7orf71A4D174 169 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 GCHFRP30047 84 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 SRIP30626 198 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 ZNF726P1Q15940 193 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 PRR9Q5T870 116 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 EIF4E3Q8N5X7 224 aaKnown RBP8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 FAM213BQ8TBF2 198 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 PHYHIPLQ96FC7 376 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 VGLL1Q99990 258 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 PRELID1Q9Y255 219 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 BOLA1Q9Y3E2 137 aa8.47□□□□□ -1.05
PRKCSH-210ENST00000589990 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 MAP1LC3B2A6NCE7 125 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 M0R3E3 92 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 GYPEP15421 78 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 FHITP49789 147 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 FGF8P55075 233 aaPredicted RBP8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 ANXA2RQ3ZCQ2 193 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 ZNF479Q96JC4 524 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 ODF3Q96PU9 254 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 MAP1LC3BQ9GZQ8 125 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 TMEM167BQ9NRX6 74 aa8.46□□□□□ -1.06
PRKCSH-210ENST00000589990 PGPA6NDG6 321 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 KLLNB2CW77 178 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 K7EP13 123 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 LECT2O14960 151 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 SLC25A5P05141 298 aaKnown RBP8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 CSN1S1P47710 185 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 SFT2D1Q8WV19 159 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 FAM19A4Q96LR4 140 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
PRKCSH-210ENST00000589990 TRGV4A0A0C4DH28 118 aa8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 A0A1B0GV50 99 aa8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 H2AFB1P0C5Y9 115 aa8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 RAB5CP51148 216 aa8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 FAM74A1Q5RGS3 127 aa8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 DPPA3Q6W0C5 159 aa8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
PRKCSH-210ENST00000589990 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 IBA57-AS1B1ANH7 110 aa8.43□□□□□ -1.06
PRKCSH-210ENST00000589990 SULT1A2P50226 295 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms