RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 MAP1LC3BQ9GZQ8 125 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF257Q9Y2Q1 563 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 UFC1Q9Y3C8 167 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 IGHV4-4A0A075B6R2 117 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 IGKV1D-37A0A075B6S9 117 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 TGIF2-C20orf24A0A0A6YYL0 155 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 C7orf77A4D0Y5 90 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 FABP4P15090 132 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ATP5G3P48201 142 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 EIF5AP63241 154 aaKnown RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF726P1Q15940 193 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 C2orf83Q53S99 150 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ZC2HC1BQ5TFG8 222 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 C10orf113Q5VZT2 155 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 FAM71F2Q6NXP2 309 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 PATE2Q6UY27 113 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 CYP2G1PQ6ZSU1 146 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 APRG1Q8IVJ8 170 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 NECAP1Q8NC96 275 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 Q8TAT8 98 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 Q8WTZ3 238 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 EEF1AKMT3Q96AZ1 226 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 RPS10P5Q9NQ39 176 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 TIMM8BQ9Y5J9 83 aaPredicted RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 TMSB15BA0A087X1C1 80 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 C9JQL5 133 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 SLC17A3O00476 420 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 SPINK4O60575 86 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BKO60814 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 TSPAN13O95857 204 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BJP06899 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 GZMBP10144 247 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BOP23527 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BBP33778 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BDP58876 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 TAS2R30P59541 319 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 SEC61GP60059 68 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BCP62807 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 GAGE2BQ13066 116 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 MRPL23Q16540 153 aaKnown RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST2H2BEQ16778 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 GAGE2EQ4V326 116 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 PDZD11Q5EBL8 140 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 GAGE2AQ6NT46 116 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 RNASEKQ6P5S7 137 aaKnown RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF738Q8NE65 137 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 OR4F5Q8NH21 305 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 MRAPQ8TCY5 172 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 DEFB104AQ8WTQ1 72 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BHQ93079 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 ISOC2Q96AB3 205 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 C2orf48Q96LS8 159 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 OR4F4Q96R69 305 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BNQ99877 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BMQ99879 126 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 RHPN1-AS1Q9BWJ2 59 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 SLC25A39Q9BZJ4 359 aaPredicted RBP2.44□□□□□ -2.02
ZNF540-207ENST00000589285 GAGE2DQ9UEU5 116 aa2.44□□□□□ -2.02
ZNF540-207ENST00000589285 KIR2DL5BA0A0G2JN68 375 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 KIR2DL5BA0A0G2JPC4 375 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 CLPSL1A2RUU4 121 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 PRSS46E5RG02 174 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 H3BQ15 152 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 HYPMO75409 117 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 PSMB8P28062 276 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 RPS20P60866 119 aaKnown RBP2.43□□□□□ -2.02
ZNF540-207ENST00000589285 SMAGPQ0VAQ4 97 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 TMEM41BQ5BJD5 291 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 Q6ZQT7 251 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 KIR2DL5AQ8N109 375 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 TTC9CQ8N5M4 171 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 FAM24BQ8N5W8 94 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF491Q8N8L2 437 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 OR1N2Q8NGR9 330 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 DYNLRB2Q8TF09 96 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 PTH2Q96A98 100 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 C11orf1Q9H5F2 150 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 Q9H8V8 135 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 DNHD1Q96M86 4753 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.43□□□□□ -2.02
ZNF540-207ENST00000589285 C17orf112F2Z3M2 114 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 MGST1P10620 155 aaKnown RBP2.43□□□□□ -2.02
ZNF540-207ENST00000589285 IGLL1P15814 213 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 AZU1P20160 251 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 NPPCP23582 126 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 PLP1P60201 277 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
ZNF540-207ENST00000589285 OR52E5Q8NH55 327 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 LYPD6BQ8NI32 183 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 ZNF502Q8TBZ5 544 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 SIGMAR1Q99720 223 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 HIST1H2BLQ99880 126 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 RNF5Q99942 180 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 HIGD1AQ9Y241 93 aa2.43□□□□□ -2.02
ZNF540-207ENST00000589285 TRAV12-2A0A075B6T6 113 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 TRAV30A0A087WSZ9 112 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 IGKV2-40A0A087WW87 121 aaPredicted RBP2.42□□□□□ -2.02
ZNF540-207ENST00000589285 PGPA6NDG6 321 aa2.42□□□□□ -2.02
ZNF540-207ENST00000589285 GCGP01275 180 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms