RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, human

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-206	ENST00000589055	TRAV21	A0A0B4J279	112 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055		G3V3Q6	166 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055	LINC00315	P59091	139 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055	IQCF2	Q8IXL9	164 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055	C5orf17	Q8NAS9	161 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055	SUN5	Q8TC36	379 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055	RASL10A	Q92737	203 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055	SPX	Q9BT56	116 aa		10.93	□□□□□ -0.66
TMEM259-206	ENST00000589055	LOC100131303	A0A0U1RQF7	123 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055		A0A1W2PPQ1	181 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055		K7EQD1	137 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	SIVA1	O15304	175 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	IGLV2-11	P01706	119 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	SUMO1	P63165	101 aa	Known RBP	10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	ZNF726P1	Q15940	193 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	LYPD5	Q6UWN5	251 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	SPATA12	Q7Z6I5	190 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	ARL6IP6	Q8N6S5	226 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	MAPKAPK5-AS1	Q8N8E1	139 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	TMEM75	Q8N9X5	138 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	OR2T35	Q8NGX2	323 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	TNFSF18	Q9UNG2	199 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	PSG8	Q9UQ74	426 aa		10.92	□□□□□ -0.66
TMEM259-206	ENST00000589055	MB	P02144	154 aa		10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	GYPE	P15421	78 aa		10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	KRTAP10-2	P60368	255 aa		10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	SERF2	P84101	59 aa		10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	MRPL23	Q16540	153 aa	Known RBP	10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	INO80E	Q8NBZ0	244 aa	Predicted RBP	10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	ACTR3C	Q9C0K3	210 aa	Predicted RBP	10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	SDF2L1	Q9HCN8	221 aa		10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	TNFRSF18	Q9Y5U5	241 aa		10.91	□□□□□ -0.66
TMEM259-206	ENST00000589055	TRAV4	A0A0B4J268	109 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055		M0R2P5	195 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	CXorf1	O96002	111 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	GCG	P01275	180 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	SRI	P30626	198 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	SLA	Q13239	276 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055		Q6ZRN7	208 aa	Predicted RBP	10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	NEGR1	Q7Z3B1	354 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	PRNT	Q86SH4	94 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	OR4C5	Q8NGB2	326 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	ASB13	Q8WXK3	278 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	NDFIP1	Q9BT67	221 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	EPDR1	Q9UM22	224 aa		10.9	□□□□□ -0.66
TMEM259-206	ENST00000589055	TRAV34	A0A0B4J273	112 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055		C9JCJ5	164 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	SMLR1	H3BR10	107 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	UBE2G2	P60604	165 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	FLI1	Q01543	452 aa	Predicted RBP	10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	DPPA3	Q6W0C5	159 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	WFDC10B	Q8IUB3	73 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	LINC00479	Q96M42	142 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	TMEM167B	Q9NRX6	74 aa		10.89	□□□□□ -0.67
TMEM259-206	ENST00000589055	SERTM2	A0A1B0GWG4	89 aa		10.88	□□□□□ -0.67
TMEM259-206	ENST00000589055	FGF8	P55075	233 aa	Predicted RBP	10.88	□□□□□ -0.67
TMEM259-206	ENST00000589055	CYB561D1	Q8N8Q1	229 aa		10.88	□□□□□ -0.67
TMEM259-206	ENST00000589055	PCNP	Q8WW12	178 aa	Known RBP	10.88	□□□□□ -0.67
TMEM259-206	ENST00000589055	KCNS1	Q96KK3	526 aa		10.88	□□□□□ -0.67
TMEM259-206	ENST00000589055	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.87	□□□□□ -0.67
TMEM259-206	ENST00000589055	FUS	P35637	526 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
TMEM259-206	ENST00000589055	RGS21	Q2M5E4	152 aa		10.87	□□□□□ -0.67
TMEM259-206	ENST00000589055	IGHV3-73	A0A0B4J1V6	119 aa		10.86	□□□□□ -0.67
TMEM259-206	ENST00000589055	CTXND1	A0A1B0GTU2	59 aa		10.86	□□□□□ -0.67
TMEM259-206	ENST00000589055		K7EQM0	130 aa		10.86	□□□□□ -0.67
TMEM259-206	ENST00000589055	ARPC5	O15511	151 aa		10.86	□□□□□ -0.67
TMEM259-206	ENST00000589055	PFN1	P07737	140 aa	Known RBP	10.86	□□□□□ -0.67
TMEM259-206	ENST00000589055	GATA1	P15976	413 aa	Predicted RBP	10.86	□□□□□ -0.67
TMEM259-206	ENST00000589055	CYTL1	Q9NRR1	136 aa		10.86	□□□□□ -0.67
TMEM259-206	ENST00000589055		A0A1W2PRE2	83 aa		10.85	□□□□□ -0.67
TMEM259-206	ENST00000589055	ORM1	P02763	201 aa		10.85	□□□□□ -0.67
TMEM259-206	ENST00000589055	BTF3	P20290	206 aa	Known RBP	10.85	□□□□□ -0.67
TMEM259-206	ENST00000589055	ZNF876P	Q49A33	203 aa		10.85	□□□□□ -0.67
TMEM259-206	ENST00000589055	SMUG1	Q53HV7	270 aa		10.85	□□□□□ -0.67
TMEM259-206	ENST00000589055	C9orf85	Q96MD7	179 aa		10.85	□□□□□ -0.67
TMEM259-206	ENST00000589055	PGPEP1L	A6NFU8	196 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	TAAR5	O14804	337 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	CDK2AP2	O75956	126 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	IFNA7	P01567	189 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	RNASE3	P12724	160 aa	Known RBP	10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	ZFP69	Q49AA0	526 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	ZNF506	Q5JVG8	444 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	AKR1C8P	Q5T2L2	129 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	CFAP126	Q5VTH2	177 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055		Q86TA4	180 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	NHLRC2	Q8NBF2	726 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	LY96	Q9Y6Y9	160 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	ARL2-SNX15	V9GYD0	113 aa		10.84	□□□□□ -0.67
TMEM259-206	ENST00000589055	FBLL1	A6NHQ2	334 aa	Known RBP	10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	FAM74A7	A6NL05	159 aa		10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	PEX7	O00628	323 aa		10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	RS1	O15537	224 aa		10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	DNAH10OS	P0CZ25	163 aa		10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	SLC25A29	Q8N8R3	303 aa		10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	TXNDC17	Q9BRA2	123 aa		10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.83	□□□□□ -0.68
TMEM259-206	ENST00000589055	IGKV3D-20	A0A0C4DH25	116 aa		10.82	□□□□□ -0.68
TMEM259-206	ENST00000589055	MAP1LC3B2	A6NCE7	125 aa		10.82	□□□□□ -0.68
TMEM259-206	ENST00000589055	FHIT	P49789	147 aa		10.82	□□□□□ -0.68
TMEM259-206	ENST00000589055	MAP1LC3B	Q9GZQ8	125 aa		10.82	□□□□□ -0.68

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