RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SRP19P09132 144 aaKnown RBP14.03□□□□□ -0.16
CIRBP-220ENST00000588917 CRIP1P50238 77 aa14.03□□□□□ -0.16
CIRBP-220ENST00000588917 MUC7Q8TAX7 377 aa14.03□□□□□ -0.16
CIRBP-220ENST00000588917 PARLQ9H300 379 aa14.03□□□□□ -0.16
CIRBP-220ENST00000588917 DKK2Q9UBU2 259 aa14.03□□□□□ -0.16
CIRBP-220ENST00000588917 CEBPGP53567 150 aa14.02□□□□□ -0.17
CIRBP-220ENST00000588917 ZNF415Q09FC8 603 aa14.02□□□□□ -0.17
CIRBP-220ENST00000588917 DAZ2Q13117 558 aaKnown RBP14.02□□□□□ -0.17
CIRBP-220ENST00000588917 FAM74A3Q4VXF1 159 aa14.02□□□□□ -0.17
CIRBP-220ENST00000588917 NHLRC2Q8NBF2 726 aa14.02□□□□□ -0.17
CIRBP-220ENST00000588917 TP53TG3Q9ULZ0 132 aa14.02□□□□□ -0.17
CIRBP-220ENST00000588917 SH2D1AO60880 128 aa14.01□□□□□ -0.17
CIRBP-220ENST00000588917 ORM1P02763 201 aa14.01□□□□□ -0.17
CIRBP-220ENST00000588917 CASC10Q5T4H9 136 aa14.01□□□□□ -0.17
CIRBP-220ENST00000588917 FAM222AQ5U5X8 452 aa14.01□□□□□ -0.17
CIRBP-220ENST00000588917 DAZAP1Q96EP5 407 aaKnown RBP14.01□□□□□ -0.17
CIRBP-220ENST00000588917 SPXQ9BT56 116 aa14.01□□□□□ -0.17
CIRBP-220ENST00000588917 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
CIRBP-220ENST00000588917 PLAC8L1A1L4L8 177 aa14□□□□□ -0.17
CIRBP-220ENST00000588917 MGST1P10620 155 aaKnown RBP14□□□□□ -0.17
CIRBP-220ENST00000588917 TCL1AP56279 114 aa14□□□□□ -0.17
CIRBP-220ENST00000588917 C11orf72Q8NBR9 251 aa14□□□□□ -0.17
CIRBP-220ENST00000588917 NOP10Q9NPE3 64 aaKnown RBP14□□□□□ -0.17
CIRBP-220ENST00000588917 LY96Q9Y6Y9 160 aa14□□□□□ -0.17
CIRBP-220ENST00000588917 ZNF727A8MUV8 499 aa13.99□□□□□ -0.17
CIRBP-220ENST00000588917 B4DEV8 164 aa13.99□□□□□ -0.17
CIRBP-220ENST00000588917 GNRH2O43555 120 aa13.99□□□□□ -0.17
CIRBP-220ENST00000588917 IGLV2-8P01709 118 aa13.99□□□□□ -0.17
CIRBP-220ENST00000588917 SMIM7Q9BQ49 75 aa13.99□□□□□ -0.17
CIRBP-220ENST00000588917 C11orf21Q9P2W6 132 aa13.99□□□□□ -0.17
CIRBP-220ENST00000588917 TRBV20OR9-2A0A075B6H5 130 aa13.98□□□□□ -0.17
CIRBP-220ENST00000588917 TYMSP04818 313 aa13.98□□□□□ -0.17
CIRBP-220ENST00000588917 LGALS9BQ3B8N2 356 aa13.98□□□□□ -0.17
CIRBP-220ENST00000588917 LINC01559Q495D7 138 aa13.98□□□□□ -0.17
CIRBP-220ENST00000588917 PRR27Q6MZM9 219 aa13.98□□□□□ -0.17
CIRBP-220ENST00000588917 OCC1Q8TAD7 63 aa13.98□□□□□ -0.17
CIRBP-220ENST00000588917 TENM2Q9NT68 2774 aa13.97□□□□□ -0.17
CIRBP-220ENST00000588917 IGKV3D-20A0A0C4DH25 116 aa13.97□□□□□ -0.17
CIRBP-220ENST00000588917 IGHV3-16A0A0C4DH30 117 aa13.97□□□□□ -0.17
CIRBP-220ENST00000588917 KRBOX1C9JBD0 128 aa13.97□□□□□ -0.17
CIRBP-220ENST00000588917 NANOS2P60321 138 aaKnown RBP13.97□□□□□ -0.17
CIRBP-220ENST00000588917 DAD1P61803 113 aa13.97□□□□□ -0.17
CIRBP-220ENST00000588917 MDFICQ9P1T7 246 aa13.97□□□□□ -0.17
CIRBP-220ENST00000588917 CELA1Q9UNI1 258 aa13.97□□□□□ -0.17
CIRBP-220ENST00000588917 S100A4P26447 101 aaKnown RBP13.96□□□□□ -0.17
CIRBP-220ENST00000588917 SRSF3P84103 164 aaKnown RBP13.96□□□□□ -0.17
CIRBP-220ENST00000588917 C12orf74Q32Q52 190 aa13.96□□□□□ -0.17
CIRBP-220ENST00000588917 M0R036 132 aa13.95□□□□□ -0.18
CIRBP-220ENST00000588917 ASIPP42127 132 aa13.95□□□□□ -0.18
CIRBP-220ENST00000588917 OR5I1Q13606 314 aa13.95□□□□□ -0.18
CIRBP-220ENST00000588917 TMEM241Q24JQ0 296 aa13.95□□□□□ -0.18
CIRBP-220ENST00000588917 SOHLH1Q5JUK2 328 aa13.95□□□□□ -0.18
CIRBP-220ENST00000588917 DNLZQ5SXM8 178 aa13.95□□□□□ -0.18
CIRBP-220ENST00000588917 PGPEP1LA6NFU8 196 aa13.94□□□□□ -0.18
CIRBP-220ENST00000588917 C9JQL5 133 aa13.94□□□□□ -0.18
CIRBP-220ENST00000588917 SPINK4O60575 86 aa13.94□□□□□ -0.18
CIRBP-220ENST00000588917 CXCL1P09341 107 aa13.94□□□□□ -0.18
CIRBP-220ENST00000588917 DEFB130BP0DP73 79 aa13.94□□□□□ -0.18
CIRBP-220ENST00000588917 DEFB130AP0DP74 79 aa13.94□□□□□ -0.18
CIRBP-220ENST00000588917 UQCC3Q6UW78 93 aa13.94□□□□□ -0.18
CIRBP-220ENST00000588917 TRAV10A0A0B4J240 114 aa13.93□□□□□ -0.18
CIRBP-220ENST00000588917 XKRY2A2RUG3 117 aa13.93□□□□□ -0.18
CIRBP-220ENST00000588917 C19orf71A6NCJ1 209 aa13.93□□□□□ -0.18
CIRBP-220ENST00000588917 M0R2P5 195 aa13.93□□□□□ -0.18
CIRBP-220ENST00000588917 P01737 135 aa13.93□□□□□ -0.18
CIRBP-220ENST00000588917 RPS20P60866 119 aaKnown RBP13.93□□□□□ -0.18
CIRBP-220ENST00000588917 LINC00612Q8N6U2 182 aa13.93□□□□□ -0.18
CIRBP-220ENST00000588917 TRGV1A0A0A0MS02 117 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 Q6ZTC4 211 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 PHLDA1Q8WV24 401 aaPredicted RBP13.92□□□□□ -0.18
CIRBP-220ENST00000588917 RASL10AQ92737 203 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 PTH2Q96A98 100 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 C18orf15Q96N68 181 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 NDUFAF3Q9BU61 184 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 IL36BQ9NZH7 164 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 NAT8Q9UHE5 227 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 DNAH7Q8WXX0 4024 aa13.92□□□□□ -0.18
CIRBP-220ENST00000588917 TRGV2A0A075B6R0 118 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 GAGE12BA1L429 117 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 NUPR2A6NF83 97 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 GAGE7O76087 117 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 ATP5G1P05496 136 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 GAGE12FP0CL80 117 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 GAGE12GP0CL81 117 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 GAGE12IP0CL82 117 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 Q6ZTI0 123 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 LINC01551Q86U37 167 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 NUDT10Q8NFP7 164 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 NUDT11Q96G61 164 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 C9orf85Q96MD7 179 aa13.91□□□□□ -0.18
CIRBP-220ENST00000588917 KLK5Q9Y337 293 aaPredicted RBP13.91□□□□□ -0.18
CIRBP-220ENST00000588917 TMSB15BA0A087X1C1 80 aa13.9□□□□□ -0.18
CIRBP-220ENST00000588917 K7EN84 100 aa13.9□□□□□ -0.18
CIRBP-220ENST00000588917 RNASE3P12724 160 aaKnown RBP13.9□□□□□ -0.18
CIRBP-220ENST00000588917 CEMP1Q6PRD7 247 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-220ENST00000588917 FAM231DQ6ZW35 169 aa13.9□□□□□ -0.18
CIRBP-220ENST00000588917 OR2D3Q8NGH3 330 aa13.9□□□□□ -0.18
CIRBP-220ENST00000588917 DEFB131BA0A096LNP1 70 aa13.89□□□□□ -0.19
CIRBP-220ENST00000588917 GRIFINA4D1Z8 144 aa13.89□□□□□ -0.19
CIRBP-220ENST00000588917 LINC00862A6NCI5 91 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms