RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 M0R2Z0 102 aa8.04□□□□□ -1.12
TOP3A-216ENST00000583804 LTAP01374 205 aa8.04□□□□□ -1.12
TOP3A-216ENST00000583804 NUTF2P61970 127 aaKnown RBP8.04□□□□□ -1.12
TOP3A-216ENST00000583804 SPINK13Q1W4C9 94 aa8.04□□□□□ -1.12
TOP3A-216ENST00000583804 COX19Q49B96 90 aa8.04□□□□□ -1.12
TOP3A-216ENST00000583804 LINC00322Q6ZN03 302 aaPredicted RBP8.04□□□□□ -1.12
TOP3A-216ENST00000583804 LINC00477Q96M19 166 aa8.04□□□□□ -1.12
TOP3A-216ENST00000583804 PACRGQ96M98 296 aaPredicted RBP8.04□□□□□ -1.12
TOP3A-216ENST00000583804 RNASE7Q9H1E1 156 aaKnown RBP8.04□□□□□ -1.12
TOP3A-216ENST00000583804 OSTCQ9NRP0 149 aa8.04□□□□□ -1.12
TOP3A-216ENST00000583804 KLF12Q9Y4X4 402 aa8.04□□□□□ -1.12
TOP3A-216ENST00000583804 XKRY2A2RUG3 117 aa8.03□□□□□ -1.12
TOP3A-216ENST00000583804 RBAKDNA6NC62 111 aa8.03□□□□□ -1.12
TOP3A-216ENST00000583804 CA1P00915 261 aaPredicted RBP8.03□□□□□ -1.12
TOP3A-216ENST00000583804 GCGP01275 180 aa8.03□□□□□ -1.12
TOP3A-216ENST00000583804 FABP4P15090 132 aa8.03□□□□□ -1.12
TOP3A-216ENST00000583804 ZNF80P51504 273 aaPredicted RBP8.03□□□□□ -1.12
TOP3A-216ENST00000583804 RPL19P84098 196 aaKnown RBP8.03□□□□□ -1.12
TOP3A-216ENST00000583804 MORN3Q6PF18 240 aaPredicted RBP8.03□□□□□ -1.12
TOP3A-216ENST00000583804 C9orf47Q6ZRZ4 202 aa8.03□□□□□ -1.12
TOP3A-216ENST00000583804 CLUHP3Q96NS8 147 aa8.03□□□□□ -1.12
TOP3A-216ENST00000583804 ZNF492Q9P255 531 aa8.03□□□□□ -1.12
TOP3A-216ENST00000583804 TMSB15BA0A087X1C1 80 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 KIR2DL5BA0A0G2JN68 375 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 KIR2DL5BA0A0G2JPC4 375 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 LINC00587B1AMM8 73 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 AMBPP02760 352 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 RNASE4P34096 147 aaKnown RBP8.02□□□□□ -1.13
TOP3A-216ENST00000583804 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
TOP3A-216ENST00000583804 AMTNQ6UX39 209 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 SBSPONQ8IVN8 264 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 KIR2DL5AQ8N109 375 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 KIR2DL5BQ8NHK3 375 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 XCL2Q9UBD3 114 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 NAGKQ9UJ70 344 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 TRAPPC1Q9Y5R8 145 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 V9GYV3 84 aa8.02□□□□□ -1.13
TOP3A-216ENST00000583804 A8MTW9 85 aa8.01□□□□□ -1.13
TOP3A-216ENST00000583804 TSPOP30536 169 aa8.01□□□□□ -1.13
TOP3A-216ENST00000583804 LEPP41159 167 aa8.01□□□□□ -1.13
TOP3A-216ENST00000583804 ERVFC1-1P60608 527 aa8.01□□□□□ -1.13
TOP3A-216ENST00000583804 PDZD11Q5EBL8 140 aa8.01□□□□□ -1.13
TOP3A-216ENST00000583804 MEGF8Q7Z7M0 2845 aa8.01□□□□□ -1.13
TOP3A-216ENST00000583804 TRBV6-1A0A0K0K1D8 114 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 SH2D1AO60880 128 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 MT-ND6P03923 174 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 GPX1P07203 203 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 GIG44P09565 113 aaPredicted RBP8□□□□□ -1.13
TOP3A-216ENST00000583804 CDKN1BP46527 198 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 CRIP1P50238 77 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 SAPCD1Q5SSQ6 148 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 FAM231DQ6ZW35 169 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 ZFAND2AQ8N6M9 145 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 TMEM18Q96B42 140 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 SMIM12Q96EX1 92 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 MLST8Q9BVC4 326 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 C1QTNF4Q9BXJ3 329 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 ZFP30Q9Y2G7 519 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 FBLL1A6NHQ2 334 aaKnown RBP8□□□□□ -1.13
TOP3A-216ENST00000583804 GZMBP10144 247 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 ESDP10768 282 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 TCL1AP56279 114 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 DEFB135Q30KP9 77 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 MUC21Q5SSG8 566 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 WDR73Q6P4I2 378 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 ODF3Q96PU9 254 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 B9D2Q9BPU9 175 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 GNB1LQ9BYB4 327 aa8□□□□□ -1.13
TOP3A-216ENST00000583804 IGHV3OR16-12A0A075B7B8 117 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 ZNF705GA8MUZ8 300 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-216ENST00000583804 IBA57Q5T440 356 aaKnown RBP7.99□□□□□ -1.13
TOP3A-216ENST00000583804 Q6ZWC4 215 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 DAZAP1Q96EP5 407 aaKnown RBP7.99□□□□□ -1.13
TOP3A-216ENST00000583804 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 FAM19A4Q96LR4 140 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 RCHY1Q96PM5 261 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 RETNQ9HD89 108 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 TIMM8BQ9Y5J9 83 aaPredicted RBP7.99□□□□□ -1.13
TOP3A-216ENST00000583804 LENEPQ9Y5L5 61 aa7.99□□□□□ -1.13
TOP3A-216ENST00000583804 SMIM27A0A1W2PRY6 76 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 C7orf71A4D174 169 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 GRIFINA4D1Z8 144 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 CRXO43186 299 aaPredicted RBP7.98□□□□□ -1.13
TOP3A-216ENST00000583804 GATCO43716 136 aaKnown RBP7.98□□□□□ -1.13
TOP3A-216ENST00000583804 INSP01308 110 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 P01737 135 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 RBMY1A1P0DJD3 496 aaKnown RBP7.98□□□□□ -1.13
TOP3A-216ENST00000583804 RBMY1CP0DJD4 496 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 HTN1P15515 57 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 CRISP2P16562 243 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 PKIAP61925 76 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 RBMY1FQ15415 496 aaKnown RBP7.98□□□□□ -1.13
TOP3A-216ENST00000583804 FAM162BQ5T6X4 162 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 RASL11AQ6T310 242 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 TMEM208Q9BTX3 173 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 GOLT1BQ9Y3E0 138 aa7.98□□□□□ -1.13
TOP3A-216ENST00000583804 TRBV7-9A0A0J9YWB2 115 aa7.97□□□□□ -1.13
TOP3A-216ENST00000583804 SPRY2O43597 315 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms