RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 C5orf17Q8NAS9 161 aa11.93□□□□□ -0.5
SMG6-214ENST00000573827 SGK494Q96LW2 274 aa11.93□□□□□ -0.5
SMG6-214ENST00000573827 TREM1Q9NP99 234 aa11.93□□□□□ -0.5
SMG6-214ENST00000573827 TRAV21A0A0B4J279 112 aa11.92□□□□□ -0.5
SMG6-214ENST00000573827 MBP02144 154 aa11.92□□□□□ -0.5
SMG6-214ENST00000573827 TYMSP04818 313 aa11.92□□□□□ -0.5
SMG6-214ENST00000573827 SLAQ13239 276 aa11.92□□□□□ -0.5
SMG6-214ENST00000573827 Q6ZRN7 208 aaPredicted RBP11.92□□□□□ -0.5
SMG6-214ENST00000573827 ICOSQ9Y6W8 199 aa11.92□□□□□ -0.5
SMG6-214ENST00000573827 FAT1Q14517 4588 aa11.92□□□□□ -0.5
SMG6-214ENST00000573827 SERTM2A0A1B0GWG4 89 aa11.91□□□□□ -0.5
SMG6-214ENST00000573827 BTF3P20290 206 aaKnown RBP11.91□□□□□ -0.5
SMG6-214ENST00000573827 LYPD5Q6UWN5 251 aa11.91□□□□□ -0.5
SMG6-214ENST00000573827 OR2T35Q8NGX2 323 aa11.91□□□□□ -0.5
SMG6-214ENST00000573827 NAGKQ9UJ70 344 aa11.91□□□□□ -0.5
SMG6-214ENST00000573827 FXYD6-FXYD2A0A087WZ82 144 aa11.9□□□□□ -0.5
SMG6-214ENST00000573827 CXorf1O96002 111 aa11.9□□□□□ -0.5
SMG6-214ENST00000573827 ACTR3CQ9C0K3 210 aaPredicted RBP11.9□□□□□ -0.5
SMG6-214ENST00000573827 CYTL1Q9NRR1 136 aa11.9□□□□□ -0.5
SMG6-214ENST00000573827 TMEM167BQ9NRX6 74 aa11.9□□□□□ -0.5
SMG6-214ENST00000573827 PSG8Q9UQ74 426 aa11.9□□□□□ -0.5
SMG6-214ENST00000573827 TRAV4A0A0B4J268 109 aa11.89□□□□□ -0.51
SMG6-214ENST00000573827 K7EQD1 137 aa11.89□□□□□ -0.51
SMG6-214ENST00000573827 M0R2P5 195 aa11.89□□□□□ -0.51
SMG6-214ENST00000573827 NXPH4O95158 308 aa11.89□□□□□ -0.51
SMG6-214ENST00000573827 SUMO1P63165 101 aaKnown RBP11.89□□□□□ -0.51
SMG6-214ENST00000573827 MRPL23Q16540 153 aaKnown RBP11.89□□□□□ -0.51
SMG6-214ENST00000573827 INO80EQ8NBZ0 244 aaPredicted RBP11.89□□□□□ -0.51
SMG6-214ENST00000573827 EPDR1Q9UM22 224 aa11.89□□□□□ -0.51
SMG6-214ENST00000573827 DNAH8Q96JB1 4490 aa11.89□□□□□ -0.51
SMG6-214ENST00000573827 SIVA1O15304 175 aa11.88□□□□□ -0.51
SMG6-214ENST00000573827 LINC00315P59091 139 aa11.88□□□□□ -0.51
SMG6-214ENST00000573827 TRGV4A0A0C4DH28 118 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 A0A1W2PRE2 83 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 FLI1Q01543 452 aaPredicted RBP11.87□□□□□ -0.51
SMG6-214ENST00000573827 RGS21Q2M5E4 152 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 DPPA3Q6W0C5 159 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 CYB561D1Q8N8Q1 229 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 TMEM75Q8N9X5 138 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 KCNS1Q96KK3 526 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 SDF2L1Q9HCN8 221 aa11.87□□□□□ -0.51
SMG6-214ENST00000573827 CTXND1A0A1B0GTU2 59 aa11.86□□□□□ -0.51
SMG6-214ENST00000573827 GCGP01275 180 aa11.86□□□□□ -0.51
SMG6-214ENST00000573827 GYPEP15421 78 aa11.86□□□□□ -0.51
SMG6-214ENST00000573827 KRTAP10-2P60368 255 aa11.86□□□□□ -0.51
SMG6-214ENST00000573827 NEGR1Q7Z3B1 354 aa11.86□□□□□ -0.51
SMG6-214ENST00000573827 C9orf85Q96MD7 179 aa11.86□□□□□ -0.51
SMG6-214ENST00000573827 KRTAP4-5Q9BYR2 181 aa11.86□□□□□ -0.51
SMG6-214ENST00000573827 BORCS7-ASMTA0A0B4J1R7 106 aa11.85□□□□□ -0.51
SMG6-214ENST00000573827 LOC100131303A0A0U1RQF7 123 aa11.85□□□□□ -0.51
SMG6-214ENST00000573827 C16orf90A8MZG2 172 aa11.85□□□□□ -0.51
SMG6-214ENST00000573827 PFN1P07737 140 aaKnown RBP11.85□□□□□ -0.51
SMG6-214ENST00000573827 GATA1P15976 413 aaPredicted RBP11.85□□□□□ -0.51
SMG6-214ENST00000573827 OR4C5Q8NGB2 326 aa11.85□□□□□ -0.51
SMG6-214ENST00000573827 TAAR5O14804 337 aa11.84□□□□□ -0.51
SMG6-214ENST00000573827 ORM1P02763 201 aa11.84□□□□□ -0.51
SMG6-214ENST00000573827 RNASE3P12724 160 aaKnown RBP11.84□□□□□ -0.51
SMG6-214ENST00000573827 SPATA12Q7Z6I5 190 aa11.84□□□□□ -0.51
SMG6-214ENST00000573827 PRNTQ86SH4 94 aa11.84□□□□□ -0.51
SMG6-214ENST00000573827 PTH2Q96A98 100 aa11.84□□□□□ -0.51
SMG6-214ENST00000573827 NDFIP1Q9BT67 221 aa11.84□□□□□ -0.51
SMG6-214ENST00000573827 TRAV34A0A0B4J273 112 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 IGKV3D-20A0A0C4DH25 116 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 FBLL1A6NHQ2 334 aaKnown RBP11.83□□□□□ -0.52
SMG6-214ENST00000573827 FAM74A7A6NL05 159 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 SMLR1H3BR10 107 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 K7EQM0 130 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 ARPC5O15511 151 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 RS1O15537 224 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 SRIP30626 198 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 SMUG1Q53HV7 270 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 WFDC10BQ8IUB3 73 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
SMG6-214ENST00000573827 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
SMG6-214ENST00000573827 FGF8P55075 233 aaPredicted RBP11.82□□□□□ -0.52
SMG6-214ENST00000573827 VPS13BQ7Z7G8 4022 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 C9JCJ5 164 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 CRIP1P50238 77 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 TIRAPP58753 221 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 UBE2G2P60604 165 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 ZNF876PQ49A33 203 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 SAPCD1Q5SSQ6 148 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 COX8CQ7Z4L0 72 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 Q86TA4 180 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 OR11H4Q8NGC9 324 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 ARL2-SNX15V9GYD0 113 aa11.81□□□□□ -0.52
SMG6-214ENST00000573827 PEX7O00628 323 aa11.8□□□□□ -0.52
SMG6-214ENST00000573827 FHITP49789 147 aa11.8□□□□□ -0.52
SMG6-214ENST00000573827 ZNF506Q5JVG8 444 aa11.8□□□□□ -0.52
SMG6-214ENST00000573827 SLC25A29Q8N8R3 303 aa11.8□□□□□ -0.52
SMG6-214ENST00000573827 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
SMG6-214ENST00000573827 AKR1C8PQ5T2L2 129 aa11.79□□□□□ -0.52
SMG6-214ENST00000573827 KCNRGQ8N5I3 272 aa11.79□□□□□ -0.52
SMG6-214ENST00000573827 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
SMG6-214ENST00000573827 TXNDC17Q9BRA2 123 aa11.79□□□□□ -0.52
SMG6-214ENST00000573827 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms