RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	GNG5	P63218	68 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	PPP1R1A	Q13522	171 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	FBXL19-AS1	Q494R0	122 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	MEIG1	Q5JSS6	88 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	C1orf195	Q5TG92	126 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	LYRM7	Q5U5X0	104 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	SPATA31B1P	Q5VZV4	182 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	SLC25A34	Q6PIV7	304 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	SHISA6	Q6ZSJ9	500 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	TMEM86A	Q8N2M4	240 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	DEFB119	Q8N690	84 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	PPP1R1C	Q8WVI7	109 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	ULBP3	Q9BZM4	244 aa		3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	ZNF469	Q96JG9	3925 aa	Predicted RBP	3.12	□□□□□ -1.91
TCF12-223	ENST00000561235	TRAV14DV4	A0A0A6YYC5	116 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	TRAV1-1	A0A0B4J248	108 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235		A0A1W2PPM0	123 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	PGP	A6NDG6	321 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	UQCRQ	O14949	82 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	SNCG	O76070	127 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	NAPSA	O96009	420 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	HRAS	P01112	189 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	APOC2	P02655	101 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	RPL7	P18124	248 aa	Known RBP	3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	PRTN3	P24158	256 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	LPAR6	P43657	344 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	ADIG	Q0VDE8	80 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	CATR1	Q13166	79 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	IHH	Q14623	411 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	MSMO1	Q15800	293 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	C6orf99	Q4VX62	202 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	RASL11A	Q6T310	242 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	LCN15	Q6UWW0	184 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	C10orf111	Q8N326	155 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	NUP35	Q8NFH5	326 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	OR2T10	Q8NGZ9	312 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	OR4A5	Q8NH83	315 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	LINC01560	Q8TB33	94 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	C18orf32	Q8TCD1	76 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	ADAT3	Q96EY9	351 aa	Predicted RBP	3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	RNF5	Q99942	180 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	SCRT1	Q9BWW7	348 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	COMMD5	Q9GZQ3	224 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	SPCS1	Q9Y6A9	102 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	LINC00312	Q9Y6C7	94 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	MED12L	Q86YW9	2145 aa		3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	NUP210	Q8TEM1	1887 aa	Predicted RBP	3.11	□□□□□ -1.91
TCF12-223	ENST00000561235	hCG_1818297	A0A087WSY0	165 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	IGHV6-1	A0A0B4J1U7	121 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	ODAM	A1E959	279 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	RIIAD1	A6NNX1	92 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	OVOL1	O14753	267 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	PFN1	P07737	140 aa	Known RBP	3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	LGALS1	P09382	135 aa	Known RBP	3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	CECR9	P0C854	216 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	MARCKSL1	P49006	195 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235		Q499Y3	187 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	TMEM86B	Q8N661	226 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	OR4X2	Q8NGF9	303 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	OR5H2	Q8NGV7	314 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	MRPL30	Q8TCC3	161 aa	Known RBP	3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	TMEM243	Q9BU79	118 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	MRPL20	Q9BYC9	149 aa	Known RBP	3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	NAA60	Q9H7X0	242 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	C8orf17	Q9NRJ1	99 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	NOTCH1	P46531	2555 aa		3.1	□□□□□ -1.91
TCF12-223	ENST00000561235	PKD1L1	Q8TDX9	2849 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	PIGBOS1	A0A0B4J2F0	54 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	CXorf1	O96002	111 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	ZNF688	P0C7X2	276 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	SLC25A6	P12236	298 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	ZNF83	P51522	516 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	SMIM11A	P58511	58 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	RRN3P1	Q2M238	152 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	RNASE13	Q5GAN3	156 aa	Known RBP	3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	TMEM256	Q8N2U0	113 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	ZNF645	Q8N7E2	425 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	OR5D14	Q8NGL3	314 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	SGMS2	Q8NHU3	365 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	FNDC9	Q8TBE3	224 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	CCL17	Q92583	94 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	LINC00526	Q96FQ7	95 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	SPACA5	Q96QH8	159 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	CST11	Q9H112	138 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	KLF13	Q9Y2Y9	288 aa	Predicted RBP	3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	PXMP4	Q9Y6I8	212 aa		3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	FLNA	P21333	2647 aa	Known RBP	3.09	□□□□□ -1.91
TCF12-223	ENST00000561235	NUP214	P35658	2090 aa	Predicted RBP	3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	SHANK1	Q9Y566	2161 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	IGKV1-27	A0A075B6S5	117 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235		C9JQL5	133 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235		M0R2P5	195 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	DEDD	O75618	318 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	KLF7	O75840	302 aa	Predicted RBP	3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	APOM	O95445	188 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	ZNF682	O95780	498 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	EPPIN	O95925	133 aa		3.08	□□□□□ -1.92
TCF12-223	ENST00000561235	IGHG2	P01859	326 aa		3.08	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms