RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 ARPC5LQ9BPX5 153 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 HHLA3Q9XRX5 114 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 TRBV7-9A0A0J9YWB2 115 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 GGTLC3B5MD39 225 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 K7EQD1 137 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 STAG3L2P0CL84 134 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 STAG3L3P0CL85 134 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 ACOT6Q3I5F7 207 aaPredicted RBP7.61□□□□□ -1.19
GABPB1-210ENST00000560825 WFDC10BQ8IUB3 73 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 RAB24Q969Q5 203 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 LINC00479Q96M42 142 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 AQP10Q96PS8 301 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 DNAH10OSP0CZ25 163 aa7.6□□□□□ -1.19
GABPB1-210ENST00000560825 CDC34P49427 236 aaPredicted RBP7.6□□□□□ -1.19
GABPB1-210ENST00000560825 TAS2R45P59539 299 aa7.6□□□□□ -1.19
GABPB1-210ENST00000560825 TDRG1Q3Y452 100 aa7.6□□□□□ -1.19
GABPB1-210ENST00000560825 RPL7L1Q6DKI1 246 aaKnown RBP7.6□□□□□ -1.19
GABPB1-210ENST00000560825 SUN5Q8TC36 379 aa7.6□□□□□ -1.19
GABPB1-210ENST00000560825 RASL10AQ92737 203 aa7.6□□□□□ -1.19
GABPB1-210ENST00000560825 PRO0255Q9UI72 69 aa7.6□□□□□ -1.19
GABPB1-210ENST00000560825 ICOSQ9Y6W8 199 aa7.6□□□□□ -1.19
GABPB1-210ENST00000560825 A0A1W2PPV4 95 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 SIVA1O15304 175 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 PTTG1O95997 202 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 GYPEP15421 78 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 GCHFRP30047 84 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 FAM159AQ6UWV7 190 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 PQLC2Q6ZP29 291 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 OR2G3Q8NGZ4 309 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 TMED6Q8WW62 240 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 MED28Q9H204 178 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 TREM1Q9NP99 234 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 LENEPQ9Y5L5 61 aa7.59□□□□□ -1.19
GABPB1-210ENST00000560825 TRAV34A0A0B4J273 112 aa7.58□□□□□ -1.2
GABPB1-210ENST00000560825 TRGV4A0A0C4DH28 118 aa7.58□□□□□ -1.2
GABPB1-210ENST00000560825 SMLR1H3BR10 107 aa7.58□□□□□ -1.2
GABPB1-210ENST00000560825 TCRAP04437 139 aa7.58□□□□□ -1.2
GABPB1-210ENST00000560825 CMTM2Q8TAZ6 248 aa7.58□□□□□ -1.2
GABPB1-210ENST00000560825 BATF3Q9NR55 127 aa7.58□□□□□ -1.2
GABPB1-210ENST00000560825 Q9UF83 564 aa7.58□□□□□ -1.2
GABPB1-210ENST00000560825 IGHV3-73A0A0B4J1V6 119 aa7.57□□□□□ -1.2
GABPB1-210ENST00000560825 Q6ZSN1 163 aa7.57□□□□□ -1.2
GABPB1-210ENST00000560825 IQCF2Q8IXL9 164 aa7.57□□□□□ -1.2
GABPB1-210ENST00000560825 PSMG3Q9BT73 122 aaPredicted RBP7.57□□□□□ -1.2
GABPB1-210ENST00000560825 TNFSF18Q9UNG2 199 aa7.57□□□□□ -1.2
GABPB1-210ENST00000560825 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
GABPB1-210ENST00000560825 TRGV11A0A075B6L2 103 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 FXYD6-FXYD2A0A087WZ82 144 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 A0A1W2PPQ1 181 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 PGPEP1LA6NFU8 196 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
GABPB1-210ENST00000560825 SUMO1P63165 101 aaKnown RBP7.56□□□□□ -1.2
GABPB1-210ENST00000560825 TTC32Q5I0X7 151 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 CYTL1Q9NRR1 136 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 PSG8Q9UQ74 426 aa7.56□□□□□ -1.2
GABPB1-210ENST00000560825 TRAV4A0A0B4J268 109 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 TRAV21A0A0B4J279 112 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 C9JCJ5 164 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 M0R2P5 195 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 CDK2AP2O75956 126 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 GCGP01275 180 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 GIPP09681 153 aaPredicted RBP7.55□□□□□ -1.2
GABPB1-210ENST00000560825 RNASE3P12724 160 aaKnown RBP7.55□□□□□ -1.2
GABPB1-210ENST00000560825 GATA1P15976 413 aaPredicted RBP7.55□□□□□ -1.2
GABPB1-210ENST00000560825 UBE2G2P60604 165 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 MRPL23Q16540 153 aaKnown RBP7.55□□□□□ -1.2
GABPB1-210ENST00000560825 NEGR1Q7Z3B1 354 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 PRNTQ86SH4 94 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 C5orf17Q8NAS9 161 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 ASB13Q8WXK3 278 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 SPXQ9BT56 116 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 EPDR1Q9UM22 224 aa7.55□□□□□ -1.2
GABPB1-210ENST00000560825 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 BTF3P20290 206 aaKnown RBP7.54□□□□□ -1.2
GABPB1-210ENST00000560825 CRIP1P50238 77 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 CFAP126Q5VTH2 177 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 SLC25A29Q8N8R3 303 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 OR4C5Q8NGB2 326 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 OR2T35Q8NGX2 323 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 C9orf85Q96MD7 179 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 JPT2Q9H910 190 aa7.54□□□□□ -1.2
GABPB1-210ENST00000560825 SRIP30626 198 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 FHITP49789 147 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 FLI1Q01543 452 aaPredicted RBP7.53□□□□□ -1.2
GABPB1-210ENST00000560825 ZNF876PQ49A33 203 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 ZNF506Q5JVG8 444 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 FAM74A1Q5RGS3 127 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 ARL6IP6Q8N6S5 226 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 SDF2L1Q9HCN8 221 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 HERC1Q15751 4861 aa7.53□□□□□ -1.2
GABPB1-210ENST00000560825 RS1O15537 224 aa7.52□□□□□ -1.2
GABPB1-210ENST00000560825 CXorf1O96002 111 aa7.52□□□□□ -1.2
GABPB1-210ENST00000560825 PFN1P07737 140 aaKnown RBP7.52□□□□□ -1.2
GABPB1-210ENST00000560825 SERF2P84101 59 aa7.52□□□□□ -1.2
GABPB1-210ENST00000560825 KRTAP4-12Q9BQ66 201 aa7.52□□□□□ -1.2
GABPB1-210ENST00000560825 SAMD10Q9BYL1 202 aa7.52□□□□□ -1.2
GABPB1-210ENST00000560825 ACTR3CQ9C0K3 210 aaPredicted RBP7.52□□□□□ -1.2
GABPB1-210ENST00000560825 ARL2-SNX15V9GYD0 113 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms