RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 DEFB130AP0DP74 79 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 GALR1P47211 349 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 YPEL3P61236 119 aaPredicted RBP6.86□□□□□ -1.31
TPM1-225ENST00000560679 PSG9Q00887 426 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 TTC32Q5I0X7 151 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 MORN5Q5VZ52 161 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 AMTNQ6UX39 209 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 PYGO2Q9BRQ0 406 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 MDFICQ9P1T7 246 aa6.86□□□□□ -1.31
TPM1-225ENST00000560679 TRAV30A0A087WSZ9 112 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 A0A0J9YX75 114 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 C5orf52A6NGY3 159 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 ZNF705GA8MUZ8 300 aaPredicted RBP6.85□□□□□ -1.31
TPM1-225ENST00000560679 OR10J4P0C629 311 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 ORM2P19652 201 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 KRTAP10-1P60331 282 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 KCNIP4Q6PIL6 250 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 LINC00305Q7Z4B0 112 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 OR1B1Q8NGR6 318 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 FXYD5Q96DB9 178 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 TCEAL7Q9BRU2 100 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 OR51M1Q9H341 326 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 HIGD1AQ9Y241 93 aa6.85□□□□□ -1.31
TPM1-225ENST00000560679 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
TPM1-225ENST00000560679 A0A1W2PPQ1 181 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
TPM1-225ENST00000560679 SMR3BP02814 79 aaPredicted RBP6.84□□□□□ -1.31
TPM1-225ENST00000560679 PYYP10082 97 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 RPL35P42766 123 aaKnown RBP6.84□□□□□ -1.31
TPM1-225ENST00000560679 LINC00315P59091 139 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 SNRPEP62304 92 aaKnown RBP6.84□□□□□ -1.31
TPM1-225ENST00000560679 SFRP2Q96HF1 295 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 BTF3L4Q96K17 158 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 C20orf173Q96LM9 149 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 IGF2BP2-AS1Q96M15 143 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 IMMP2LQ96T52 175 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
TPM1-225ENST00000560679 FAT3Q8TDW7 4589 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 PGPEP1LA6NFU8 196 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 TOMM40O96008 361 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 TYMSP04818 313 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 ATP5G1P05496 136 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 PSG1P11464 419 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 AZU1P20160 251 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 GNG4P50150 75 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 AKR1D1P51857 326 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 LYZP61626 148 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 SUMO1P63165 101 aaKnown RBP6.83□□□□□ -1.32
TPM1-225ENST00000560679 HAMPP81172 84 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 CENPWQ5EE01 88 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 OR10G8Q8NGN5 311 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 OCC1Q8TAD7 63 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 C17orf77Q96MU5 243 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 ZNF586Q9NXT0 402 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 TMEM14CQ9P0S9 112 aa6.83□□□□□ -1.32
TPM1-225ENST00000560679 TRAV9-1A0A075B6T8 112 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 J3QL48 77 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 K7EN84 100 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 M0R2Z0 102 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 PEX7O00628 323 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 TRGC2P03986 189 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 RD3LP0DJH9 198 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 TSPOP30536 169 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 CNN1P51911 297 aaKnown RBP6.82□□□□□ -1.32
TPM1-225ENST00000560679 TAS2R60P59551 318 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 CDPF1Q6NVV7 123 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 RNF125Q96EQ8 232 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 TMEM208Q9BTX3 173 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 PGPEP1Q9NXJ5 209 aa6.82□□□□□ -1.32
TPM1-225ENST00000560679 CBY3A6NI87 242 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 H3BRN7 92 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 ISLRO14498 428 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 PHOX2AO14813 284 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 S100A8P05109 93 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 ID1P41134 155 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 FABP9Q0Z7S8 132 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 ESRGQ1W209 222 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 SPINK13Q1W4C9 94 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
TPM1-225ENST00000560679 EBLN2Q6P2I7 272 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 Q6ZSN1 163 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 S100A7AQ86SG5 101 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 LINC00518Q8N0U6 118 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 SHANK2-AS3Q9BTD1 123 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 SLC25A39Q9BZJ4 359 aaPredicted RBP6.81□□□□□ -1.32
TPM1-225ENST00000560679 OSTCQ9NRP0 149 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 IL36BQ9NZH7 164 aa6.81□□□□□ -1.32
TPM1-225ENST00000560679 MRPS16Q9Y3D3 137 aaKnown RBP6.81□□□□□ -1.32
TPM1-225ENST00000560679 TRAV26-1A0A087WT03 109 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 GCGP01275 180 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms