RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 DUX4L9Q6RFH8 374 aaPredicted RBP10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 DEFB125Q8N687 156 aa10.43□□□□□ -0.74
CSPG4P11-201ENST00000560634 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
CSPG4P11-201ENST00000560634 FAM120AOSQ5T036 256 aa10.42□□□□□ -0.74
CSPG4P11-201ENST00000560634 TRAV12-1A0A0B4J245 112 aa10.42□□□□□ -0.74
CSPG4P11-201ENST00000560634 K7ERJ3 54 aa10.42□□□□□ -0.74
CSPG4P11-201ENST00000560634 TINCRA0A1B0GVN0 87 aa10.42□□□□□ -0.74
CSPG4P11-201ENST00000560634 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
CSPG4P11-201ENST00000560634 ORMDL1Q9P0S3 153 aa10.42□□□□□ -0.74
CSPG4P11-201ENST00000560634 BAALC-AS2P0C853 105 aa10.41□□□□□ -0.74
CSPG4P11-201ENST00000560634 K7EN84 100 aa10.41□□□□□ -0.74
CSPG4P11-201ENST00000560634 CRYGCP07315 174 aa10.41□□□□□ -0.74
CSPG4P11-201ENST00000560634 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
CSPG4P11-201ENST00000560634 RBM3P98179 157 aaKnown RBP10.41□□□□□ -0.74
CSPG4P11-201ENST00000560634 WIPF3A6NGB9 483 aa10.4□□□□□ -0.74
CSPG4P11-201ENST00000560634 hADV29S1A0JD25 119 aa10.4□□□□□ -0.74
CSPG4P11-201ENST00000560634 H0YGX0 51 aa10.4□□□□□ -0.74
CSPG4P11-201ENST00000560634 DYNAPQ8N1N2 210 aa10.4□□□□□ -0.74
CSPG4P11-201ENST00000560634 Q9H8V8 135 aa10.4□□□□□ -0.74
CSPG4P11-201ENST00000560634 NBL1P41271 181 aa10.4□□□□□ -0.75
CSPG4P11-201ENST00000560634 Q6ZVH6 145 aa10.4□□□□□ -0.75
CSPG4P11-201ENST00000560634 IGF2BP2-AS1Q96M15 143 aa10.4□□□□□ -0.75
CSPG4P11-201ENST00000560634 KLF2Q9Y5W3 355 aaPredicted RBP10.4□□□□□ -0.75
CSPG4P11-201ENST00000560634 ZNF503-AS2A6NEH8 195 aa10.39□□□□□ -0.75
CSPG4P11-201ENST00000560634 MRAPQ8TCY5 172 aa10.39□□□□□ -0.75
CSPG4P11-201ENST00000560634 PRR30Q53SZ7 412 aaPredicted RBP10.39□□□□□ -0.75
CSPG4P11-201ENST00000560634 PKIGQ9Y2B9 76 aa10.39□□□□□ -0.75
CSPG4P11-201ENST00000560634 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
CSPG4P11-201ENST00000560634 CCL25O15444 150 aa10.39□□□□□ -0.75
CSPG4P11-201ENST00000560634 PTPRDP23468 1912 aa10.38□□□□□ -0.75
CSPG4P11-201ENST00000560634 Q96MF0 132 aa10.38□□□□□ -0.75
CSPG4P11-201ENST00000560634 DIAPH2-AS1Q14236 149 aa10.38□□□□□ -0.75
CSPG4P11-201ENST00000560634 U3KQE9 123 aa10.38□□□□□ -0.75
CSPG4P11-201ENST00000560634 PCP2Q8IVA1 136 aa10.37□□□□□ -0.75
CSPG4P11-201ENST00000560634 GNRH2O43555 120 aa10.37□□□□□ -0.75
CSPG4P11-201ENST00000560634 CGB3P0DN86 165 aa10.37□□□□□ -0.75
CSPG4P11-201ENST00000560634 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.75
CSPG4P11-201ENST00000560634 C17orf77Q96MU5 243 aa10.37□□□□□ -0.75
CSPG4P11-201ENST00000560634 FAM215AQ9Y5M1 114 aa10.37□□□□□ -0.75
CSPG4P11-201ENST00000560634 PLCE1Q9P212 2302 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 B5MCH6 92 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 H3BQ85 93 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 CGB7P0DN87 165 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 IGLL5B9A064 214 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 XCL1P47992 114 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 FOXE3Q13461 319 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 WISP1O95388 367 aa10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
CSPG4P11-201ENST00000560634 LY6G6EA0A0G2JKS1 128 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 MAPK1IP1LQ8NDC0 245 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 U3KQA8 63 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 C22orf46C9J442 243 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 UBE2BP63146 152 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 F6UB75 175 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 ZNF524Q96C55 264 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 NOP10Q9NPE3 64 aaKnown RBP10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 VPREB3Q9UKI3 123 aa10.35□□□□□ -0.75
CSPG4P11-201ENST00000560634 SBF1O95248 1867 aa10.34□□□□□ -0.75
CSPG4P11-201ENST00000560634 GTF3C1Q12789 2109 aa10.34□□□□□ -0.75
CSPG4P11-201ENST00000560634 SH2D6Q7Z4S9 175 aa10.34□□□□□ -0.75
CSPG4P11-201ENST00000560634 TRAV4A0A0B4J268 109 aa10.34□□□□□ -0.75
CSPG4P11-201ENST00000560634 PTPRQQ9UMZ3 2332 aa10.34□□□□□ -0.75
CSPG4P11-201ENST00000560634 HEATR5AQ86XA9 2040 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGKV2-29A2NJV5 120 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 ATOX1O00244 68 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 C1orf43Q9BWL3 253 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 CENPVL3A0A0U1RRI6 287 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 NACAE9PAV3 2078 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 A0A096LPF7 62 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 GP9P14770 177 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 ARTNQ5T4W7 220 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 C11orf53Q8IXP5 236 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 OPRPNQ99935 248 aaPredicted RBP10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 HIGD1BQ9P298 99 aa10.33□□□□□ -0.76
CSPG4P11-201ENST00000560634 TEX48A0A1B0GUV7 120 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 ETDCA0A1B0GVM5 59 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 NDUFC2O95298 119 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 TEN1Q86WV5 123 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 BUB3O43684 328 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 CLPSL2Q6UWE3 100 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGKV1OR2-108A0A075B7D4 117 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 A0A0B4J2C4 111 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGKV1-17P01599 117 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 DAZ4Q86SG3 579 aaKnown RBP10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 NPBQ8NG41 125 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 DAZ3Q9NR90 486 aaKnown RBP10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 ZFP2Q6ZN57 461 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 IGFBPL1Q8WX77 278 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 I3L2K1 104 aa10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 GATA1P15976 413 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 HOXB4P17483 251 aaPredicted RBP10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 MRPL23Q16540 153 aaKnown RBP10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 TCF20Q9UGU0 1960 aaKnown RBP10.31□□□□□ -0.76
CSPG4P11-201ENST00000560634 RLFQ13129 1914 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms