RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 NDUFAF1Q9Y375 327 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 IGSF10Q6WRI0 2623 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 CPDO75976 1380 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 MED23Q9ULK4 1368 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 PTPRGP23470 1445 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 CHD9Q3L8U1 2897 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 HRNRQ86YZ3 2850 aaPredicted RBP0.01□□□□□ -2.41
SPG11-222ENST00000560435 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 CELSR1Q9NYQ6 3014 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 LOC285556D6RIA3 1793 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 FER1L6Q2WGJ9 1857 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 NINQ8N4C6 2090 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 TPRP12270 2363 aaKnown RBP0.01□□□□□ -2.41
SPG11-222ENST00000560435 ZFYVE26Q68DK2 2539 aa0.01□□□□□ -2.41
SPG11-222ENST00000560435 POLQO75417 2590 aa0□□□□□ -2.41
SPG11-222ENST00000560435 ABCA12Q86UK0 2595 aa0□□□□□ -2.41
SPG11-222ENST00000560435 UNC79Q9P2D8 2635 aa0□□□□□ -2.41
SPG11-222ENST00000560435 IGHV1-24A0A0C4DH33 117 aa0□□□□□ -2.41
SPG11-222ENST00000560435 A0A1B0GX51 115 aa0□□□□□ -2.41
SPG11-222ENST00000560435 M0QZK8 103 aa0□□□□□ -2.41
SPG11-222ENST00000560435 CDC42EP2O14613 210 aa0□□□□□ -2.41
SPG11-222ENST00000560435 TPST1O60507 370 aa0□□□□□ -2.41
SPG11-222ENST00000560435 EDF1O60869 148 aaKnown RBP0□□□□□ -2.41
SPG11-222ENST00000560435 OR2H2O95918 312 aa0□□□□□ -2.41
SPG11-222ENST00000560435 IGKCP01834 107 aa0□□□□□ -2.41
SPG11-222ENST00000560435 CD3DP04234 171 aa0□□□□□ -2.41
SPG11-222ENST00000560435 TCRAP04437 139 aa0□□□□□ -2.41
SPG11-222ENST00000560435 CCKP06307 115 aa0□□□□□ -2.41
SPG11-222ENST00000560435 KDELR1P24390 212 aa0□□□□□ -2.41
SPG11-222ENST00000560435 CKS2P33552 79 aa0□□□□□ -2.41
SPG11-222ENST00000560435 ARHGAP31Q2M1Z3 1444 aa0□□□□□ -2.41
SPG11-222ENST00000560435 HSD17B12Q53GQ0 312 aa0□□□□□ -2.41
SPG11-222ENST00000560435 SAMD13Q5VXD3 122 aa0□□□□□ -2.41
SPG11-222ENST00000560435 SPINK6Q6UWN8 80 aa0□□□□□ -2.41
SPG11-222ENST00000560435 TMEM91Q6ZNR0 172 aa0□□□□□ -2.41
SPG11-222ENST00000560435 IDO2Q6ZQW0 420 aa0□□□□□ -2.41
SPG11-222ENST00000560435 PBRM1Q86U86 1689 aa0□□□□□ -2.41
SPG11-222ENST00000560435 OR4S1Q8NGB4 309 aa0□□□□□ -2.41
SPG11-222ENST00000560435 OR8J3Q8NGG0 315 aa0□□□□□ -2.41
SPG11-222ENST00000560435 OTOSQ8NHW6 89 aa0□□□□□ -2.41
SPG11-222ENST00000560435 BRK1Q8WUW1 75 aa0□□□□□ -2.41
SPG11-222ENST00000560435 SMIM7Q9BQ49 75 aa0□□□□□ -2.41
SPG11-222ENST00000560435 ATG5Q9H1Y0 275 aa0□□□□□ -2.41
SPG11-222ENST00000560435 SPANXA1Q9NS26 97 aa0□□□□□ -2.41
SPG11-222ENST00000560435 METTL1Q9UBP6 276 aaKnown RBP0□□□□□ -2.41
SPG11-222ENST00000560435 GINS2Q9Y248 185 aa0□□□□□ -2.41
SPG11-222ENST00000560435 HSPB11Q9Y547 144 aa0□□□□□ -2.41
SPG11-222ENST00000560435 DNAJC15Q9Y5T4 150 aa0□□□□□ -2.41
SPG11-222ENST00000560435 ANK1P16157 1881 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TRPM7Q96QT4 1865 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 KIDINS220Q9ULH0 1771 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.01□□□□□ -2.41
SPG11-222ENST00000560435 OVOS2A0A0G2JMS6 1433 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 BLMP54132 1417 aaPredicted RBP-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TRAV36DV7A0A075B6V5 113 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TRAV2A0A0B4J234 112 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TRBV10-1A0A0K0K1A3 114 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TEX49A0A1B0GTD5 131 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 PNMA8CA0A1B0GUJ8 204 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 GNG14A0A1W2PPG7 69 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 J3KT08 172 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 DEGS1O15121 323 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TNFSF15O95150 251 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 MPC1LP0DKB6 136 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 HLA-DRB4P13762 266 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 HIST1H1BP16401 226 aaKnown RBP-0.01□□□□□ -2.41
SPG11-222ENST00000560435 ADCYAP1P18509 176 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 S100GP29377 79 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 SDC4P31431 198 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 AKR1D1P51857 326 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 PSPHP78330 225 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 PLGLB1Q02325 96 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 EMX2Q04743 252 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 OR8B8Q15620 311 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TMEM244Q5VVB8 128 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 ATP11AUNQ6ZP68 121 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 SLC25A26Q70HW3 274 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 SMIM15Q7Z3B0 74 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 VMO1Q7Z5L0 202 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TAC4Q86UU9 113 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 NDUFA11Q86Y39 141 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 OR8I2Q8N0Y5 310 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TSKUQ8WUA8 353 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 SKA2Q8WVK7 121 aaPredicted RBP-0.01□□□□□ -2.41
SPG11-222ENST00000560435 PPDPFLQ8WWR9 84 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 SELENOSQ9BQE4 189 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TMEM14BQ9NUH8 114 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 SPANXCQ9NY87 97 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 HLA-DRB4X5D2U9 266 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 ATG2AQ2TAZ0 1938 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 TANC1Q9C0D5 1861 aa-0.01□□□□□ -2.41
SPG11-222ENST00000560435 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.01□□□□□ -2.41
SPG11-222ENST00000560435 NCOR2Q9Y618 2525 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 CACNA1HO95180 2353 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 SPAG17Q6Q759 2223 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 UHRF1BP1LA0JNW5 1464 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 ESPL1Q14674 2120 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 NSD1Q96L73 2696 aaPredicted RBP-0.02□□□□□ -2.41
SPG11-222ENST00000560435 BORCS7-ASMTA0A0B4J1R7 106 aa-0.02□□□□□ -2.41
SPG11-222ENST00000560435 A0A1B0GW64 132 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms