RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SLC25A5P05141 298 aaKnown RBP8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 NBEAP1P0C6P0 100 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 ERCC8Q13216 396 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 WFDC2Q14508 124 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 ZNF266Q14584 549 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 ZNF726P1Q15940 193 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 EIF4E3Q8N5X7 224 aaKnown RBP8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 MRPL53Q96EL3 112 aaKnown RBP8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 FAM19A4Q96LR4 140 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 TP53TG3Q9ULZ0 132 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 IGKV2-40A0A087WW87 121 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 IBA57-AS1B1ANH7 110 aa8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 OR7C2O60412 319 aa8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 IGKV2D-40P01614 121 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 GYPEP15421 78 aa8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 UBE2L3P68036 154 aaKnown RBP8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 CD300CQ08708 224 aa8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 ZNF415Q09FC8 603 aa8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 BTN1A1Q13410 526 aa8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 INO80EQ8NBZ0 244 aaPredicted RBP8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 Q9HAA7 133 aa8.48□□□□□ -1.05
RABGGTA-213ENST00000560127 KLLNB2CW77 178 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 STAG3L2P0CL84 134 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 STAG3L3P0CL85 134 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 ACOT6Q3I5F7 207 aaPredicted RBP8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 KHDC3LQ587J8 217 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 LINC01556Q5JQF7 62 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 IBA57Q5T440 356 aaKnown RBP8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 PRR9Q5T870 116 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 KCNRGQ8N5I3 272 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 OR10G4Q8NGN3 311 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 OR10G9Q8NGN4 311 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 OR10G7Q8NGN6 311 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 AGPAT4-IT1Q9H0P7 198 aa8.47□□□□□ -1.05
RABGGTA-213ENST00000560127 TRGV4A0A0C4DH28 118 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 IGHV3-38A0A0C4DH36 116 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 HMSDA8MTL9 139 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 SFTA3P0C7M3 94 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 ARL14EPLP0DKL9 152 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 CDC34P49427 236 aaPredicted RBP8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 ZNF345Q14585 488 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 SUN5Q8TC36 379 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 PCNPQ8WW12 178 aaKnown RBP8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 RAB24Q969Q5 203 aa8.46□□□□□ -1.06
RABGGTA-213ENST00000560127 A0A1B0GVG6 124 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 SERF2P84101 59 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 Q6ZQT7 251 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 IQCF2Q8IXL9 164 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 ZFAND2AQ8N6M9 145 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 ZNF479Q96JC4 524 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 TXNDC17Q9BRA2 123 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 PRELID1Q9Y255 219 aa8.45□□□□□ -1.06
RABGGTA-213ENST00000560127 ORM1P02763 201 aa8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 TAS2R45P59539 299 aa8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 RANP62826 216 aaKnown RBP8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 PQLC2Q6ZP29 291 aa8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 C9orf47Q6ZRZ4 202 aa8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 TCTE3Q8IZS6 198 aa8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 Q8TAT8 98 aa8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 CHAC1Q9BUX1 264 aa8.44□□□□□ -1.06
RABGGTA-213ENST00000560127 hCG_2014768A0A024R1R8 64 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 BORCS7-ASMTA0A0B4J1R7 106 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 GGTLC3B5MD39 225 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 RGS13O14921 159 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 BCL2L11O43521 198 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 MT1HL1P0DM35 61 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 CRISP2P16562 243 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 GCHFRP30047 84 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 TIRAPP58753 221 aa8.43□□□□□ -1.06
RABGGTA-213ENST00000560127 IGHV1OR15-1A0A075B7D0 117 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 LOC100131303A0A0U1RQF7 123 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 DIRC3C9JPN6 131 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 TAAR5O14804 337 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 LECT2O14960 151 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 FHITP49789 147 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 HNRNPA3P51991 378 aaKnown RBP8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 GNG5P63218 68 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 CIRBP-AS1Q8TBR5 109 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 ARPC5LQ9BPX5 153 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 AAMDCQ9H7C9 122 aa8.42□□□□□ -1.06
RABGGTA-213ENST00000560127 A0A1W2PPV4 95 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 C9JCJ5 164 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 RS1O15537 224 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 GPX1P07203 203 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 IGHV3-30-3P0DP02 117 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 LGALSLQ3ZCW2 172 aaPredicted RBP8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 TMUB2Q71RG4 321 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 TVP23CQ96ET8 276 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 ZNF492Q9P255 531 aa8.41□□□□□ -1.06
RABGGTA-213ENST00000560127 TRAV8-1A0A0A6YYK1 113 aa8.4□□□□□ -1.06
RABGGTA-213ENST00000560127 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms