RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 DNAJC30Q96LL9 226 aa12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 LENEPQ9Y5L5 61 aa12.44□□□□□ -0.42
HMBOX1-212ENST00000558662 MBD3L4A6NDZ8 208 aaPredicted RBP12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 MBD3L3A6NE82 208 aaPredicted RBP12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 MBD3L5A6NJ08 208 aaPredicted RBP12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 LINC01548A6NM66 108 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 TMEM178BH3BS89 294 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 CRLF1O75462 422 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 DUSP14O95147 198 aaKnown RBP12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 CNTFRP26992 372 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 LOXP28300 417 aaPredicted RBP12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 MBD3L2Q8NHZ7 208 aaPredicted RBP12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 NRGNQ92686 78 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 PLXNB1O43157 2135 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 TRIOO75962 3097 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 TIMM23O14925 209 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 ACYP1P07311 99 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 ZNF883P0CG24 379 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 APELAP0DMC3 54 aa12.43□□□□□ -0.42
HMBOX1-212ENST00000558662 IGLV11-55A0A075B6I3 123 aa12.42□□□□□ -0.42
HMBOX1-212ENST00000558662 IGHV3-72A0A0B4J1Y9 119 aa12.42□□□□□ -0.42
HMBOX1-212ENST00000558662 BUB1B-PAK6H3BSN5 160 aa12.42□□□□□ -0.42
HMBOX1-212ENST00000558662 TMEM170BQ5T4T1 132 aa12.42□□□□□ -0.42
HMBOX1-212ENST00000558662 TMEM263Q8WUH6 116 aaKnown RBP12.42□□□□□ -0.42
HMBOX1-212ENST00000558662 DPH3P1Q9H4G8 78 aa12.42□□□□□ -0.42
HMBOX1-212ENST00000558662 A0A0J9YX75 114 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 C17orf100A8MU93 164 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 M0R2P5 195 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 PMVKQ15126 192 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 C5orf47Q569G3 176 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 DYNAPQ8N1N2 210 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 J3KRW8 73 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 TMEM101Q96IK0 257 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 TIMM17AQ99595 171 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 SPXQ9BT56 116 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 C21orf62Q9NYP8 219 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
HMBOX1-212ENST00000558662 MED13Q9UHV7 2174 aa12.39□□□□□ -0.43
HMBOX1-212ENST00000558662 IGLV4-69A0A075B6H9 119 aa12.39□□□□□ -0.43
HMBOX1-212ENST00000558662 LGALS3P17931 250 aaKnown RBP12.39□□□□□ -0.43
HMBOX1-212ENST00000558662 NPBQ8NG41 125 aa12.39□□□□□ -0.43
HMBOX1-212ENST00000558662 LINC01587Q99440 93 aa12.39□□□□□ -0.43
HMBOX1-212ENST00000558662 ARFGEF3Q5TH69 2177 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 TRAV26-2A0A0B4J265 109 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 FOXC1Q12948 553 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 C9orf47Q6ZRZ4 202 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 LRRC75A-AS1Q8N1F1 130 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 POM121L12Q8N7R1 296 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 TECTAO75443 2155 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 A0A1B0GX51 115 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 SDHAF1A6NFY7 115 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 ANXA2RQ3ZCQ2 193 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 KLHL30-AS1Q8NEE0 82 aa12.38□□□□□ -0.43
HMBOX1-212ENST00000558662 A4D1N5 150 aa12.37□□□□□ -0.43
HMBOX1-212ENST00000558662 J3QQQ9 107 aa12.37□□□□□ -0.43
HMBOX1-212ENST00000558662 NBR2O15453 112 aa12.37□□□□□ -0.43
HMBOX1-212ENST00000558662 CRYGDP07320 174 aa12.37□□□□□ -0.43
HMBOX1-212ENST00000558662 FANCD2OSQ96PS1 177 aa12.37□□□□□ -0.43
HMBOX1-212ENST00000558662 MALRD1Q5VYJ5 2156 aa12.37□□□□□ -0.43
HMBOX1-212ENST00000558662 SVILO95425 2214 aa12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 F8W735 103 aaPredicted RBP12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 LEPROTO15243 131 aa12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 COX6CP09669 75 aa12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 Q6ZQT7 251 aa12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 AMELXQ99217 191 aa12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 CTSZQ9UBR2 303 aa12.36□□□□□ -0.43
HMBOX1-212ENST00000558662 TRAV17A0A0B4J275 112 aa12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 CCL8P80075 99 aa12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 TRPT1Q86TN4 253 aaKnown RBP12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 KLK15Q9H2R5 256 aa12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 C11orf21Q9P2W6 132 aa12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 IGIPA6NJ69 53 aa12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 CRIP2P52943 208 aaPredicted RBP12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 C2orf82Q6UX34 121 aa12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 AGPAT4-IT1Q9H0P7 198 aa12.35□□□□□ -0.43
HMBOX1-212ENST00000558662 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
HMBOX1-212ENST00000558662 A0A087WW49 117 aa12.34□□□□□ -0.43
HMBOX1-212ENST00000558662 RPS28P62857 69 aaKnown RBP12.34□□□□□ -0.43
HMBOX1-212ENST00000558662 EBI3Q14213 229 aa12.34□□□□□ -0.43
HMBOX1-212ENST00000558662 IGFL2Q6UWQ7 119 aa12.34□□□□□ -0.43
HMBOX1-212ENST00000558662 TEX49A0A1B0GTD5 131 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 UQCRQO14949 82 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 WIPF1O43516 503 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 ZNF876PQ49A33 203 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 LYPD2Q6UXB3 125 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 Q6ZS46 218 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 C1orf210Q8IVY1 113 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 TMEM105Q8N8V8 129 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 PRSS33Q8NF86 280 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 COL6A3P12111 3177 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 DLX1P56177 255 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.33□□□□□ -0.44
HMBOX1-212ENST00000558662 RNF223E7ERA6 249 aa12.32□□□□□ -0.44
HMBOX1-212ENST00000558662 IGHV1-69P01742 117 aa12.32□□□□□ -0.44
HMBOX1-212ENST00000558662 CTSGP08311 255 aa12.32□□□□□ -0.44
HMBOX1-212ENST00000558662 Q1RN00 199 aa12.32□□□□□ -0.44
HMBOX1-212ENST00000558662 KLK9Q2XQG4 91 aa12.32□□□□□ -0.44
HMBOX1-212ENST00000558662 C3orf22Q8N5N4 141 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms