RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ALG5Q9Y673 324 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 TMEM30CPA0ZSE6 113 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 FUOMA2VDF0 154 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 NAP1L6A6NFF2 107 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 OR5H14A6NHG9 310 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 A8MWP6 167 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 TMEM238C9JI98 176 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 PFDN1O60925 122 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 NDUFB6O95139 128 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 SIX6O95475 246 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 NAPSAO96009 420 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 HTN3P15516 51 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 DTYMKP23919 212 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 RPL12P30050 165 aaKnown RBP3.52□□□□□ -1.85
RTF1-204ENST00000558117 FAUP35544 74 aaKnown RBP3.52□□□□□ -1.85
RTF1-204ENST00000558117 RAB14P61106 215 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 CDK10Q15131 360 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 GUK1Q16774 197 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 FAM162BQ5T6X4 162 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 CLEC19AQ6UXS0 136 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 OR13C8Q8NGS7 320 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 SRSF12Q8WXF0 261 aaKnown RBP3.52□□□□□ -1.85
RTF1-204ENST00000558117 ARL11Q969Q4 196 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 SMIM12Q96EX1 92 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 TMEM243Q9BU79 118 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 TAF9BQ9HBM6 251 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.52□□□□□ -1.85
RTF1-204ENST00000558117 TAS2R8Q9NYW2 309 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 ANAPC10Q9UM13 185 aa3.52□□□□□ -1.85
RTF1-204ENST00000558117 PPP5D1E7EU14 171 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 DNASE2O00115 360 aaPredicted RBP3.51□□□□□ -1.85
RTF1-204ENST00000558117 CA11O75493 328 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 HBZP02008 142 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 M6PRP20645 277 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 SSTR5P35346 364 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 PPP1CCP36873 323 aaKnown RBP3.51□□□□□ -1.85
RTF1-204ENST00000558117 PSMB2P49721 201 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 ZNF137PP52743 207 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 RPL23P62829 140 aaKnown RBP3.51□□□□□ -1.85
RTF1-204ENST00000558117 SSBP1Q04837 148 aaKnown RBP3.51□□□□□ -1.85
RTF1-204ENST00000558117 PMVKQ15126 192 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 SP6Q3SY56 376 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 AADACL3Q5VUY0 350 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 AKAP14Q86UN6 197 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 LINC00337Q8N6G1 96 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 TERB2Q8NHR7 220 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 KCNS1Q96KK3 526 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 RTBDNQ9BSG5 229 aaPredicted RBP3.51□□□□□ -1.85
RTF1-204ENST00000558117 MARVELD1Q9BSK0 173 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 FBXL15Q9H469 300 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 SCP2D1Q9UJQ7 156 aa3.51□□□□□ -1.85
RTF1-204ENST00000558117 IGHV6-1A0A0B4J1U7 121 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 OR4C46A6NHA9 309 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 C8orf87E5RJ46 101 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 DHFRP00374 187 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 FABP1P07148 127 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 OR4E1P0C645 316 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 RPL37AP61513 92 aaKnown RBP3.5□□□□□ -1.85
RTF1-204ENST00000558117 HLA-DRB3P79483 266 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 SMAGPQ0VAQ4 97 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 PPP1R1AQ13522 171 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 OR2F1Q13607 317 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 ORMDL2Q53FV1 153 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 ZNF880Q6PDB4 577 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 OR10J5Q8NHC4 309 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 FMC1Q96HJ9 113 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 SMIM8Q96KF7 97 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 PRRT1Q99946 306 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 UPK3BQ9BT76 320 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 FXYD6Q9H0Q3 95 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 MED28Q9H204 178 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 VSIRQ9H7M9 311 aa3.5□□□□□ -1.85
RTF1-204ENST00000558117 RBM7Q9Y580 266 aaKnown RBP3.5□□□□□ -1.85
RTF1-204ENST00000558117 TRBV6-7A0A0A0MS04 114 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 IGHV3-74A0A0B4J1X5 117 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 TRAV8-2A0A0B4J237 113 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 C9orf170A2RU37 121 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 C15orf65H3BRN8 121 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 UPK2O00526 184 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 GGCTO75223 188 aaKnown RBP3.49□□□□□ -1.85
RTF1-204ENST00000558117 CCNKO75909 580 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 PPYP01298 95 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 REG1AP05451 166 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 CRISP2P16562 243 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 CXCL3P19876 107 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 IL3RAP26951 378 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 TCL1AP56279 114 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 HMGN3Q15651 99 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 ZNF818PQ6ZRF7 136 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 LHFPL1Q86WI0 220 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 H1FOOQ8IZA3 346 aaPredicted RBP3.49□□□□□ -1.85
RTF1-204ENST00000558117 C20orf203Q8NBC4 194 aa3.49□□□□□ -1.85
RTF1-204ENST00000558117 ZNF680Q8NEM1 530 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms