RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 RTN4IP1Q8WWV3 396 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-212ENST00000557477 MAL2Q969L2 176 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 LINC01587Q99440 93 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 NMES1Q9C002 83 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 EDA2RQ9HAV5 297 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 MANBALQ9NQG1 85 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 PRO0461Q9UI25 63 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 PKIGQ9Y2B9 76 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 FIS1Q9Y3D6 152 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 SEC16AO15027 2179 aa2.81□□□□□ -1.96
PRPF39-212ENST00000557477 NSD1Q96L73 2696 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-212ENST00000557477 STAB1Q9NY15 2570 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 FN1P02751 2386 aaKnown RBP2.8□□□□□ -1.96
PRPF39-212ENST00000557477 AKAP6Q13023 2319 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 DAPL1A0PJW8 107 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 DPRXA6NFQ7 191 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 DEFB108AA8MXU0 73 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 H3BUT2 72 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 MPDU1O75352 247 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 CXorf1O96002 111 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 HBE1P02100 147 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 IGLC6P0CF74 106 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 PTHLHP12272 177 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 GALR1P47211 349 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 MTPNP58546 118 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 SSBP1Q04837 148 aaKnown RBP2.8□□□□□ -1.96
PRPF39-212ENST00000557477 CD164Q04900 197 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 SYCNQ0VAF6 134 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 FUT5Q11128 374 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 GUSBP1Q15486 140 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 HRCT1Q6UXD1 115 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 GOLT1AQ6ZVE7 132 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 FAM19A1Q7Z5A9 133 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 MRPL55Q7Z7F7 128 aaKnown RBP2.8□□□□□ -1.96
PRPF39-212ENST00000557477 TMEM256Q8N2U0 113 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 OR5D14Q8NGL3 314 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 OR5H2Q8NGV7 314 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 OR2T10Q8NGZ9 312 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 OR4K13Q8NH42 304 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 C18orf32Q8TCD1 76 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 AQP3Q92482 292 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 RBMXL1Q96E39 390 aaKnown RBP2.8□□□□□ -1.96
PRPF39-212ENST00000557477 PLA2G12AQ9BZM1 189 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 COMMD5Q9GZQ3 224 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 CST11Q9H112 138 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 RNASE7Q9H1E1 156 aaKnown RBP2.8□□□□□ -1.96
PRPF39-212ENST00000557477 MTFP1Q9UDX5 166 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 RCL1Q9Y2P8 373 aaKnown RBP2.8□□□□□ -1.96
PRPF39-212ENST00000557477 TRAPPC1Q9Y5R8 145 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 MAP1AP78559 2803 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-212ENST00000557477 ANKRD12Q6UB98 2062 aa2.8□□□□□ -1.96
PRPF39-212ENST00000557477 TRAV5A0A0B4J249 113 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 ARRDC5A6NEK1 342 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 GGTLC3B5MD39 225 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 C4orf51C9J302 202 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 H7C1H1 209 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 CRXO43186 299 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-212ENST00000557477 SNCGO76070 127 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 OXTP01178 125 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 GYPAP02724 150 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 PRH1P02810 166 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 MT-ND6P03923 174 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 MRPL3P09001 348 aaKnown RBP2.79□□□□□ -1.96
PRPF39-212ENST00000557477 CPMP14384 443 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 SLC38A11Q08AI6 406 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF791Q3KP31 576 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-212ENST00000557477 RPL7L1Q6DKI1 246 aaKnown RBP2.79□□□□□ -1.96
PRPF39-212ENST00000557477 NTM-AS1Q6ZSK4 140 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 FAM231DQ6ZW35 169 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 C11orf72Q8NBR9 251 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 SCGB1C1Q8TD33 95 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF721Q8TF20 911 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 BORCS7Q96B45 105 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 PLEKHB2Q96CS7 222 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 NEURL3Q96EH8 262 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 TAAR3PQ9P1P4 343 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 RABAC1Q9UI14 185 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 CHCHD2Q9Y6H1 151 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-212ENST00000557477 PXMP4Q9Y6I8 212 aa2.79□□□□□ -1.96
PRPF39-212ENST00000557477 NBEAL1Q6ZS30 2694 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 NACAE9PAV3 2078 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 SCN3AQ9NY46 2000 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 ARHGAP21Q5T5U3 1957 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 IGKV2D-24A0A075B6R9 120 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 TMED7-TICAM2A0A0A6YYA0 188 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 FAM236DA0A1B0GTK5 79 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 A6NIN4 97 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 RIIAD1A6NNX1 92 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 CEACAM18A8MTB9 384 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF736B4DX44 427 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-212ENST00000557477 SYS1-DBNDD2H3BUS1 97 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 PITX3O75364 302 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 ZNF324O75467 553 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-212ENST00000557477 APOMO95445 188 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 PRB2P02812 416 aaPredicted RBP2.78□□□□□ -1.96
PRPF39-212ENST00000557477 IGKV3-11P04433 115 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 SLC25A5P05141 298 aaKnown RBP2.78□□□□□ -1.96
PRPF39-212ENST00000557477 FAM236CP0DP71 79 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 SLC25A16P16260 332 aa2.78□□□□□ -1.96
PRPF39-212ENST00000557477 IGFBP3P17936 291 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms