RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 FMC1Q96HJ9 113 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 LINC00479Q96M42 142 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 LINC01587Q99440 93 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
SHMT2-224ENST00000556737 PKHD1P08F94 4074 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 TRAV8-1A0A0A6YYK1 113 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 SERTM2A0A1B0GWG4 89 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 H7BYZ3 331 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 LEPP41159 167 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 ERCC8Q13216 396 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 TMEM78Q5T7P6 136 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 TMEM88Q6PEY1 159 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 SVBPQ8N300 66 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 NHLRC2Q8NBF2 726 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 TVP23CQ96ET8 276 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 NDFIP1Q9BT67 221 aa7.28□□□□□ -1.24
SHMT2-224ENST00000556737 PGPEP1LA6NFU8 196 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 KLLNB2CW77 178 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 P0DMU3 169 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 FAM231AP0DMU4 169 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 FAM231CP0DMU5 169 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 DEFB130BP0DP73 79 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 DEFB130AP0DP74 79 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 FLI1Q01543 452 aaPredicted RBP7.27□□□□□ -1.25
SHMT2-224ENST00000556737 TMEM183BQ1AE95 376 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 Q86TA4 180 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 BAGE2Q86Y30 109 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 LINC00612Q8N6U2 182 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 POM121L12Q8N7R1 296 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 TMEM75Q8N9X5 138 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 Q8TAT8 98 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 PSG8Q9UQ74 426 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 CARHSP1Q9Y2V2 147 aaKnown RBP7.27□□□□□ -1.25
SHMT2-224ENST00000556737 NACAE9PAV3 2078 aa7.27□□□□□ -1.25
SHMT2-224ENST00000556737 TRAV12-3A0A0B4J271 114 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 C7orf71A4D174 169 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 C9JCJ5 164 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 SNAPINO95295 136 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 HTN1P15515 57 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 CRISP2P16562 243 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 BTN1A1Q13410 526 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 PRR9Q5T870 116 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 PRR27Q6MZM9 219 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 ZNF493Q6ZR52 646 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 C9orf47Q6ZRZ4 202 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 ARL6IP6Q8N6S5 226 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 VGLL1Q99990 258 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 AGPAT4-IT1Q9H0P7 198 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 NOP10Q9NPE3 64 aaKnown RBP7.26□□□□□ -1.25
SHMT2-224ENST00000556737 TIMM8BQ9Y5J9 83 aaPredicted RBP7.26□□□□□ -1.25
SHMT2-224ENST00000556737 DYNC1H1Q14204 4646 aaKnown RBP7.26□□□□□ -1.25
SHMT2-224ENST00000556737 PKD1P98161 4303 aa7.26□□□□□ -1.25
SHMT2-224ENST00000556737 RBAKDNA6NC62 111 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 FBLL1A6NHQ2 334 aaKnown RBP7.25□□□□□ -1.25
SHMT2-224ENST00000556737 RPL23P62829 140 aaKnown RBP7.25□□□□□ -1.25
SHMT2-224ENST00000556737 PNRC1Q12796 327 aaPredicted RBP7.25□□□□□ -1.25
SHMT2-224ENST00000556737 C10orf91Q5T1B1 145 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 ZFAND2AQ8N6M9 145 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 CLRN3Q8NCR9 226 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 LINC00477Q96M19 166 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 PYGO2Q9BRQ0 406 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 LINC00467Q9BRT7 94 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 SDF2L1Q9HCN8 221 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 RPS10P5Q9NQ39 176 aa7.25□□□□□ -1.25
SHMT2-224ENST00000556737 TRBV20OR9-2A0A075B6H5 130 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 CBY3A6NI87 242 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 ZNF324O75467 553 aaPredicted RBP7.24□□□□□ -1.25
SHMT2-224ENST00000556737 ATP5G1P05496 136 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 ZNF138P52744 262 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 SAPCD1Q5SSQ6 148 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 C15orf53Q8NAA6 179 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 C11orf72Q8NBR9 251 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 OCC1Q8TAD7 63 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 DAZAP1Q96EP5 407 aaKnown RBP7.24□□□□□ -1.25
SHMT2-224ENST00000556737 KRTAP17-1Q9BYP8 105 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 ZFP30Q9Y2G7 519 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 KLF12Q9Y4X4 402 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 KIAA1109Q2LD37 5005 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 DNAH11Q96DT5 4516 aa7.24□□□□□ -1.25
SHMT2-224ENST00000556737 F5H768 121 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 LTAP01374 205 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 IGLV2-11P01706 119 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 ERVFC1-1P60608 527 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 OR5I1Q13606 314 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 RNF212Q495C1 297 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 Q6ZQT7 251 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 LINC01551Q86U37 167 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 C8orf49Q96NF6 230 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 BIN3Q9NQY0 253 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 LY96Q9Y6Y9 160 aa7.23□□□□□ -1.25
SHMT2-224ENST00000556737 TRBV7-9A0A0J9YWB2 115 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 TRBV6-1A0A0K0K1D8 114 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 K7EN84 100 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 MT-ND4LP03901 98 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 GPX1P07203 203 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 RNASE4P34096 147 aaKnown RBP7.22□□□□□ -1.25
SHMT2-224ENST00000556737 DAZ2Q13117 558 aaKnown RBP7.22□□□□□ -1.25
SHMT2-224ENST00000556737 RHEBQ15382 184 aa7.22□□□□□ -1.25
SHMT2-224ENST00000556737 SMUG1Q53HV7 270 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms