RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 Q56UQ5 140 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 LCN12Q6JVE5 192 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 ACP7Q6ZNF0 438 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 ANKRD29Q8N6D5 301 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF525Q8N782 197 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 OR8B3Q8NGG8 313 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 CLDND2Q8NHS1 167 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 SLC25A38Q96DW6 304 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 PGLYRP3Q96LB9 341 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 GPR21Q99679 349 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 FAM173AQ9BQD7 235 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 C20orf78Q9BR46 151 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 TMEM147Q9BVK8 224 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 C21orf62Q9NYP8 219 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 DNAJC15Q9Y5T4 150 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 NBEAL2Q6ZNJ1 2754 aa3.29□□□□□ -1.88
ATXN3-225ENST00000554214 MPDZO75970 2070 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 FAM24AA6NFZ4 105 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 A8MT66 165 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 H0YGG7 62 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 H7C1H1 209 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 J3QQQ9 107 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 FCN1O00602 326 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 IGHV3-7P01780 117 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 IGF1P05019 195 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 OR5AL1P0C617 328 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 P0DMU3 169 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 FAM231AP0DMU4 169 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 FAM231CP0DMU5 169 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 CRYGSP22914 178 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 IL3RAP26951 378 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 PPP1CCP36873 323 aaKnown RBP3.28□□□□□ -1.88
ATXN3-225ENST00000554214 NMUP48645 174 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 PRDX1Q06830 199 aaKnown RBP3.28□□□□□ -1.88
ATXN3-225ENST00000554214 IL15RAQ13261 267 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 WFDC2Q14508 124 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF141Q15928 474 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 VMA21Q3ZAQ7 101 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF678Q5SXM1 525 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 Q5XG85 94 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 TMEM14EPQ6UXP3 125 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 SPATA12Q7Z6I5 190 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 PIANPQ8IYJ0 282 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 OR10AC1Q8NH08 325 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 STAG3L4Q8TBR4 150 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 TMEM158Q8WZ71 300 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 DPH3Q96FX2 82 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 OR8B2Q96RD0 313 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 SMIM7Q9BQ49 75 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 GNB1LQ9BYB4 327 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 PLA2G12AQ9BZM1 189 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 SLC39A9Q9NUM3 307 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 ZNF407Q9C0G0 2248 aa3.28□□□□□ -1.88
ATXN3-225ENST00000554214 CR1P17927 2039 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 ARHGAP21Q5T5U3 1957 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 IGLV3-12A0A075B6K2 115 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV13-1A0A0B4J241 112 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV26-2A0A0B4J265 109 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 IGKV1-8A0A0C4DH67 115 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 E9PLD3 99 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 C11orf98E9PRG8 122 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 CXCL13O43927 109 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 OR1I1O60431 355 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 CD3DP04234 171 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 ZNF708P17019 499 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 MPV17P39210 176 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 LOXL1Q08397 574 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-225ENST00000554214 SPRNQ5BIV9 151 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 NMSQ5H8A3 153 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 DMKNQ6E0U4 476 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-225ENST00000554214 TCF23Q7RTU1 214 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 TEN1Q86WV5 123 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 RPS19BP1Q86WX3 136 aaKnown RBP3.27□□□□□ -1.89
ATXN3-225ENST00000554214 PIFOQ8TCI5 191 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 DNAJA3Q96EY1 480 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 SLC25A44Q96H78 314 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-225ENST00000554214 OR2A5Q96R48 311 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 AMELYQ99218 206 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 FAM103A1Q9BTL3 118 aaKnown RBP3.27□□□□□ -1.89
ATXN3-225ENST00000554214 PAXXQ9BUH6 204 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 SPRR3Q9UBC9 169 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
ATXN3-225ENST00000554214 HEATR5AQ86XA9 2040 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 DNAJC13O75165 2243 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 TRAV27A0A087WT01 109 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 TRBV7-7A0A0K0K1E9 115 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 FAM236AA0A1B0GUQ0 79 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 FAM236BA0A1B0GV22 79 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 A6NIN4 97 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 M0R1B8 84 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 SSSCA1O60232 199 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 NUPR1O60356 82 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 C1orf105O95561 183 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 P01737 135 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 IGHG2P01859 326 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 PYYP10082 97 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 MDKP21741 143 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-225ENST00000554214 CBLN1P23435 193 aa3.26□□□□□ -1.89
ATXN3-225ENST00000554214 FOXA3P55318 350 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-225ENST00000554214 CXCL6P80162 114 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms