RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 GP9P14770 177 aa12.05□□□□□ -0.48
ARHGEF40-202ENST00000553709 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
ARHGEF40-202ENST00000553709 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
ARHGEF40-202ENST00000553709 CR1LQ2VPA4 569 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 RBAKDNA6NC62 111 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 K7EP34 96 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 ZGRF1Q86YA3 2104 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 MRPL53Q96EL3 112 aaKnown RBP12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 LRP4O75096 1905 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 I3L2K1 104 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 HIST1H4AP62805 103 aaKnown RBP12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 CFHR3Q02985 330 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 ZNRF2Q8NHG8 242 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 ELANEP08246 267 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 TAL2Q16559 108 aa12.04□□□□□ -0.48
ARHGEF40-202ENST00000553709 SIVA1O15304 175 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 CFHR4Q92496 578 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 SRSF2Q01130 221 aaKnown RBP12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 MORN5Q5VZ52 161 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 CEND1Q8N111 149 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 DNAH12Q6ZR08 3092 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 IGHV3-38A0A0C4DH36 116 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 K7EIM0 57 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 NDUFA12Q9UI09 145 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 LENEPQ9Y5L5 61 aa12.03□□□□□ -0.48
ARHGEF40-202ENST00000553709 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.48
ARHGEF40-202ENST00000553709 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.48
ARHGEF40-202ENST00000553709 IGKV1-17P01599 117 aa12.02□□□□□ -0.48
ARHGEF40-202ENST00000553709 FOXE3Q13461 319 aa12.02□□□□□ -0.48
ARHGEF40-202ENST00000553709 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.48
ARHGEF40-202ENST00000553709 NPBQ8NG41 125 aa12.02□□□□□ -0.48
ARHGEF40-202ENST00000553709 DNAJC30Q96LL9 226 aa12.02□□□□□ -0.48
ARHGEF40-202ENST00000553709 RITA1Q96K30 269 aa12.02□□□□□ -0.49
ARHGEF40-202ENST00000553709 ATP6V0BQ99437 205 aa12.02□□□□□ -0.49
ARHGEF40-202ENST00000553709 A0A1W2PPM0 123 aa12.02□□□□□ -0.49
ARHGEF40-202ENST00000553709 F6UB75 175 aa12.02□□□□□ -0.49
ARHGEF40-202ENST00000553709 K7EP13 123 aa12.02□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
ARHGEF40-202ENST00000553709 F8W1H4 67 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 ETDBQ3ZM63 59 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 GAGE2AQ6NT46 116 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 CENPVL3A0A0U1RRI6 287 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 ZNF493Q6ZR52 646 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGF2BP2-AS1Q96M15 143 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 MUC6Q6W4X9 2439 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 VWC2LB2RUY7 222 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 TMEM243Q9BU79 118 aa12.01□□□□□ -0.49
ARHGEF40-202ENST00000553709 GAGE7O76087 117 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 GAGE12FP0CL80 117 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 GAGE12GP0CL81 117 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 GAGE12IP0CL82 117 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 H3BMM0 161 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 J3QQQ9 107 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGFBPL1Q8WX77 278 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 UBE2WQ96B02 151 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 EML6Q6ZMW3 1958 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGLV11-55A0A075B6I3 123 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGHV7-81A0A0B4J1V7 117 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 GNRH2O43555 120 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 NUPR1O60356 82 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 PRO1854Q9UHT4 67 aa12□□□□□ -0.49
ARHGEF40-202ENST00000553709 FAM167A-AS1Q96KT0 104 aa11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 FGF6P10767 208 aa11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 PPDPFLQ8WWR9 84 aa11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 K7EMI3 77 aa11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 K7ERJ3 54 aa11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 FOXI2Q6ZQN5 318 aa11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 KLF12Q9Y4X4 402 aa11.99□□□□□ -0.49
ARHGEF40-202ENST00000553709 PRSS29PA6NIE9 313 aa11.98□□□□□ -0.49
ARHGEF40-202ENST00000553709 PFN2P35080 140 aa11.98□□□□□ -0.49
ARHGEF40-202ENST00000553709 INS-IGF2F8WCM5 200 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 C11orf1Q9H5F2 150 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 KMT2EQ8IZD2 1858 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 CTSGP08311 255 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 DAD1P61803 113 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 GATA1P15976 413 aaPredicted RBP11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 SEM1Q6ZVN7 128 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 GAGE6Q13070 117 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 DEFB112Q30KQ8 113 aa11.97□□□□□ -0.49
ARHGEF40-202ENST00000553709 F5H768 121 aa11.96□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGHV4-59P01825 116 aa11.96□□□□□ -0.49
ARHGEF40-202ENST00000553709 INAFM2P0DMQ5 153 aa11.96□□□□□ -0.49
ARHGEF40-202ENST00000553709 NUP210LQ5VU65 1888 aa11.96□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGLV2-23P01705 113 aa11.96□□□□□ -0.49
ARHGEF40-202ENST00000553709 EDA2RQ9HAV5 297 aa11.96□□□□□ -0.49
ARHGEF40-202ENST00000553709 ODF3L1Q8IXM7 274 aa11.96□□□□□ -0.49
ARHGEF40-202ENST00000553709 IGKV1OR2-108A0A075B7D4 117 aa11.96□□□□□ -0.5
ARHGEF40-202ENST00000553709 PCP2Q8IVA1 136 aa11.96□□□□□ -0.5
ARHGEF40-202ENST00000553709 VPREB3Q9UKI3 123 aa11.96□□□□□ -0.5
ARHGEF40-202ENST00000553709 RHOHQ15669 191 aa11.95□□□□□ -0.5
ARHGEF40-202ENST00000553709 HERVK_113P63121 156 aa11.95□□□□□ -0.5
ARHGEF40-202ENST00000553709 H3BMG7 143 aa11.95□□□□□ -0.5
ARHGEF40-202ENST00000553709 HOXD3P31249 432 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF40-202ENST00000553709 C12orf74Q32Q52 190 aa11.95□□□□□ -0.5
ARHGEF40-202ENST00000553709 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF40-202ENST00000553709 OTOGLQ3ZCN5 2332 aa11.94□□□□□ -0.5
ARHGEF40-202ENST00000553709 RNASE13Q5GAN3 156 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-202ENST00000553709 IGHV4-61A0A0C4DH41 118 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms