RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 LOC110117498A0A087WWA1 95 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 C3orf85A0A1B0GTC6 90 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 TRBV6-4A0A1B0GX49 114 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 C9orf170A2RU37 121 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 INE1O15225 51 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 EDF1O60869 148 aaKnown RBP1.09□□□□□ -2.23
CCDC38-208ENST00000549876 IGHV3-33P01772 117 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 COX7CP15954 63 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 FAM74A1Q5RGS3 127 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 ATP11AUNQ6ZP68 121 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 FOXI2Q6ZQN5 318 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 GKN2Q86XP6 184 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.09□□□□□ -2.23
CCDC38-208ENST00000549876 SDF2Q99470 211 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 PSMG3Q9BT73 122 aaPredicted RBP1.09□□□□□ -2.23
CCDC38-208ENST00000549876 SNRNP25Q9BV90 132 aaKnown RBP1.09□□□□□ -2.23
CCDC38-208ENST00000549876 TAS2R8Q9NYW2 309 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 LSM2Q9Y333 95 aaKnown RBP1.09□□□□□ -2.23
CCDC38-208ENST00000549876 SNURFQ9Y675 71 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 KIAA1549LQ6ZVL6 1849 aa1.09□□□□□ -2.23
CCDC38-208ENST00000549876 MGAMO43451 1857 aa1.09□□□□□ -2.24
CCDC38-208ENST00000549876 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.09□□□□□ -2.24
CCDC38-208ENST00000549876 ADGRB1O14514 1584 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 ALPK2Q86TB3 2170 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 CR1P17927 2039 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 NINQ8N4C6 2090 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 IGKV3D-7A0A0C4DH55 119 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 IGKV3OR2-268A0A0C4DH90 116 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 A6NN06 94 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 F6UZH7 168 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 F8W1H4 67 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 J3QLW9 94 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 NUPR1O60356 82 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 IGF2P01344 180 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 ZNF25P17030 456 aaPredicted RBP1.08□□□□□ -2.24
CCDC38-208ENST00000549876 MIR22HGQ0VDD5 57 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 MPV17LQ2QL34 196 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 OCIAD2Q56VL3 154 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 FAM19A2Q8N3H0 131 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 CDC42SE1Q9NRR8 79 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 PTPRFP10586 1907 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 CEP192Q8TEP8 1941 aa1.08□□□□□ -2.24
CCDC38-208ENST00000549876 FGD6Q6ZV73 1430 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 COL4A1P02462 1669 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 ATG2AQ2TAZ0 1938 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 CECR2Q9BXF3 1484 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 MRC2Q9UBG0 1479 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 KIDINS220Q9ULH0 1771 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 LOC107984156A0A0G2JMH3 177 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 H3BRM9 83 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 CORTO00230 105 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 GEMIN2O14893 280 aaKnown RBP1.07□□□□□ -2.24
CCDC38-208ENST00000549876 AKAIN1P0CW23 69 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 HIST1H1DP16402 221 aaKnown RBP1.07□□□□□ -2.24
CCDC38-208ENST00000549876 ADCYAP1P18509 176 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 GNG4P50150 75 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 IDO2Q6ZQW0 420 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 LINC00299Q6ZSB3 139 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 Q6ZUT4 128 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 SLC25A26Q70HW3 274 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 ARL17AQ8IVW1 177 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 DEFB119Q8N690 84 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 PP6455Q8WZ26 134 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 DPH3Q96FX2 82 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 NAA60Q9H7X0 242 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 NOP16Q9Y3C1 178 aaKnown RBP1.07□□□□□ -2.24
CCDC38-208ENST00000549876 KIF13AQ9H1H9 1805 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 HEATR1Q9H583 2144 aaKnown RBP1.07□□□□□ -2.24
CCDC38-208ENST00000549876 AKAP11Q9UKA4 1901 aa1.07□□□□□ -2.24
CCDC38-208ENST00000549876 MBD5Q9P267 1494 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 IGKV3-7A0A075B6H7 116 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 IGKV2-40A0A087WW87 121 aaPredicted RBP1.06□□□□□ -2.24
CCDC38-208ENST00000549876 IGLV3-32A0A0A0MS00 114 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 A0A1W2PRS3 328 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 CCDC179H3BU77 68 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 IGKV2D-40P01614 121 aaPredicted RBP1.06□□□□□ -2.24
CCDC38-208ENST00000549876 IL9P15248 144 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 MEIG1Q5JSS6 88 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 ZCCHC23Q6ZST2 131 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 C3orf62Q6ZUJ4 267 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 SNX29P2Q8IUI4 249 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 C5orf17Q8NAS9 161 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 VSTM2AQ8TAG5 236 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 DYNLRB2Q8TF09 96 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 PPDPFLQ8WWR9 84 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 PPP3R2Q96LZ3 170 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 C12orf57Q99622 126 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 SCN3BQ9NY72 215 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 ERBINQ96RT1 1412 aa1.06□□□□□ -2.24
CCDC38-208ENST00000549876 SIP14410 1827 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 CFTRP13569 1480 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 ANK1P16157 1881 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 CHD3Q12873 2000 aaKnown RBP1.05□□□□□ -2.24
CCDC38-208ENST00000549876 PIGBOS1A0A0B4J2F0 54 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 A0A0J9YY99 117 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 ATP6V1G2-DDX39BF2Z307 99 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 CCL25O15444 150 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 TNFP01375 233 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 SMIM6P0DI80 62 aa1.05□□□□□ -2.24
CCDC38-208ENST00000549876 PIPP12273 146 aaPredicted RBP1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms