RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 SMIM7Q9BQ49 75 aa8.43□□□□□ -1.06
SNHG1-221ENST00000544983 SPXQ9BT56 116 aa8.43□□□□□ -1.06
SNHG1-221ENST00000544983 DKK2Q9UBU2 259 aa8.43□□□□□ -1.06
SNHG1-221ENST00000544983 NAGKQ9UJ70 344 aa8.43□□□□□ -1.06
SNHG1-221ENST00000544983 TRBV20OR9-2A0A075B6H5 130 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 DEFB4AO15263 64 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 SH2D1AO60880 128 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 ORM1P02763 201 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 CRIP1P50238 77 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 TCL1AP56279 114 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 LGALS9BQ3B8N2 356 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 LINC01559Q495D7 138 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 MUC21Q5SSG8 566 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 C11orf72Q8NBR9 251 aa8.42□□□□□ -1.06
SNHG1-221ENST00000544983 DAZAP1Q96EP5 407 aaKnown RBP8.42□□□□□ -1.06
SNHG1-221ENST00000544983 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 B4DEV8 164 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 IGLV2-8P01709 118 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 CXCL1P09341 107 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 MGST1P10620 155 aaKnown RBP8.41□□□□□ -1.06
SNHG1-221ENST00000544983 CEBPGP53567 150 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 EMP1P54849 157 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 SOHLH1Q5JUK2 328 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 DNLZQ5SXM8 178 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 FAM222AQ5U5X8 452 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 UQCC3Q6UW78 93 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 Q6ZQT7 251 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 NHLRC2Q8NBF2 726 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 NDUFAF3Q9BU61 184 aa8.41□□□□□ -1.06
SNHG1-221ENST00000544983 IGHV3-16A0A0C4DH30 117 aa8.4□□□□□ -1.06
SNHG1-221ENST00000544983 XKRY2A2RUG3 117 aa8.4□□□□□ -1.06
SNHG1-221ENST00000544983 KRBOX1C9JBD0 128 aa8.4□□□□□ -1.06
SNHG1-221ENST00000544983 PRM2P04554 102 aa8.4□□□□□ -1.06
SNHG1-221ENST00000544983 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
SNHG1-221ENST00000544983 MUC7Q8TAX7 377 aa8.4□□□□□ -1.06
SNHG1-221ENST00000544983 NOP10Q9NPE3 64 aaKnown RBP8.4□□□□□ -1.06
SNHG1-221ENST00000544983 GSN-AS1Q9NRJ2 163 aa8.4□□□□□ -1.06
SNHG1-221ENST00000544983 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.06
SNHG1-221ENST00000544983 HUWE1Q7Z6Z7 4374 aaKnown RBP8.4□□□□□ -1.07
SNHG1-221ENST00000544983 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 C19orf71A6NCJ1 209 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 C3orf84H3BNL1 204 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 GNRH2O43555 120 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 SPINK4O60575 86 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 TYMSP04818 313 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 S100A4P26447 101 aaKnown RBP8.39□□□□□ -1.07
SNHG1-221ENST00000544983 ASIPP42127 132 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 DAD1P61803 113 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 OR5I1Q13606 314 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 TMEM241Q24JQ0 296 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 PRR27Q6MZM9 219 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 LINC00612Q8N6U2 182 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 OCC1Q8TAD7 63 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 PTH2Q96A98 100 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 C18orf15Q96N68 181 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 IL36BQ9NZH7 164 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 MDFICQ9P1T7 246 aa8.39□□□□□ -1.07
SNHG1-221ENST00000544983 LINC00862A6NCI5 91 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 C9JQL5 133 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 M0R2P5 195 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 P01737 135 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 MED14OSP0DP75 135 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 SRSF3P84103 164 aaKnown RBP8.38□□□□□ -1.07
SNHG1-221ENST00000544983 C12orf74Q32Q52 190 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 FAM231DQ6ZW35 169 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 LINC01551Q86U37 167 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 RASL10AQ92737 203 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 NAT8Q9UHE5 227 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 CELA1Q9UNI1 258 aa8.38□□□□□ -1.07
SNHG1-221ENST00000544983 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
SNHG1-221ENST00000544983 NUPR2A6NF83 97 aa8.37□□□□□ -1.07
SNHG1-221ENST00000544983 M0R036 132 aa8.37□□□□□ -1.07
SNHG1-221ENST00000544983 C9orf85Q96MD7 179 aa8.37□□□□□ -1.07
SNHG1-221ENST00000544983 TRGV1A0A0A0MS02 117 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 PGPEP1LA6NFU8 196 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 K7EN84 100 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 CIDEAO60543 219 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 ATP5G1P05496 136 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 SFTA3P0C7M3 94 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 DEFB130BP0DP73 79 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 DEFB130AP0DP74 79 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 NANOS2P60321 138 aaKnown RBP8.36□□□□□ -1.07
SNHG1-221ENST00000544983 PHLDA1Q8WV24 401 aaPredicted RBP8.36□□□□□ -1.07
SNHG1-221ENST00000544983 FAM210BQ96KR6 192 aa8.36□□□□□ -1.07
SNHG1-221ENST00000544983 TRGV2A0A075B6R0 118 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 A0A1W2PPQ1 181 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 OR5AL1P0C617 328 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 RNASE3P12724 160 aaKnown RBP8.35□□□□□ -1.07
SNHG1-221ENST00000544983 ERVFC1-1P60608 527 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 PNRC1Q12796 327 aaPredicted RBP8.35□□□□□ -1.07
SNHG1-221ENST00000544983 CT83Q5H943 113 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 Q6ZTC4 211 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 Q6ZTI0 123 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 SYT8Q8NBV8 401 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 NUDT10Q8NFP7 164 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 OR2D3Q8NGH3 330 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 NUDT11Q96G61 164 aa8.35□□□□□ -1.07
SNHG1-221ENST00000544983 SCRT2Q9NQ03 307 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms