RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 SNURFLB1AK76 121 aa8.75□□□□□ -1.01
DDX55-210ENST00000543016 DAZ2Q13117 558 aaKnown RBP8.75□□□□□ -1.01
DDX55-210ENST00000543016 UQCC3Q6UW78 93 aa8.75□□□□□ -1.01
DDX55-210ENST00000543016 CXorf65A6NEN9 183 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 ZNF727A8MUV8 499 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 AZU1P20160 251 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 CRIP1P50238 77 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 ZNF415Q09FC8 603 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 C11orf45Q8TAV5 145 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 SMIM7Q9BQ49 75 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 SPXQ9BT56 116 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 NAGKQ9UJ70 344 aa8.74□□□□□ -1.01
DDX55-210ENST00000543016 TRBV20OR9-2A0A075B6H5 130 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 PLAC8L1A1L4L8 177 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 SH2D1AO60880 128 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 IGLV2-8P01709 118 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 ORM1P02763 201 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 CXCL1P09341 107 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
DDX55-210ENST00000543016 CEBPGP53567 150 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 TCL1AP56279 114 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 SOHLH1Q5JUK2 328 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 MUC21Q5SSG8 566 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 DNLZQ5SXM8 178 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 NHLRC2Q8NBF2 726 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 C11orf72Q8NBR9 251 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
DDX55-210ENST00000543016 DKK2Q9UBU2 259 aa8.73□□□□□ -1.01
DDX55-210ENST00000543016 DEFB4AO15263 64 aa8.72□□□□□ -1.01
DDX55-210ENST00000543016 EMP1P54849 157 aa8.72□□□□□ -1.01
DDX55-210ENST00000543016 RPS20P60866 119 aaKnown RBP8.72□□□□□ -1.01
DDX55-210ENST00000543016 TMEM241Q24JQ0 296 aa8.72□□□□□ -1.01
DDX55-210ENST00000543016 Q6ZQT7 251 aa8.72□□□□□ -1.01
DDX55-210ENST00000543016 OCC1Q8TAD7 63 aa8.72□□□□□ -1.01
DDX55-210ENST00000543016 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
DDX55-210ENST00000543016 TGP01266 2768 aa8.71□□□□□ -1.01
DDX55-210ENST00000543016 HUWE1Q7Z6Z7 4374 aaKnown RBP8.71□□□□□ -1.01
DDX55-210ENST00000543016 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 IGHV3-16A0A0C4DH30 117 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 XKRY2A2RUG3 117 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 LINC00862A6NCI5 91 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 B4DEV8 164 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 KRBOX1C9JBD0 128 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 C9JQL5 133 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 PRM2P04554 102 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 TYMSP04818 313 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 SRSF3P84103 164 aaKnown RBP8.71□□□□□ -1.02
DDX55-210ENST00000543016 FAM222AQ5U5X8 452 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 PTH2Q96A98 100 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 NOP10Q9NPE3 64 aaKnown RBP8.71□□□□□ -1.02
DDX55-210ENST00000543016 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.02
DDX55-210ENST00000543016 C19orf71A6NCJ1 209 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 GNRH2O43555 120 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 SPINK4O60575 86 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 P01737 135 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 MED14OSP0DP75 135 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 S100A4P26447 101 aaKnown RBP8.7□□□□□ -1.02
DDX55-210ENST00000543016 ASIPP42127 132 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 OR5I1Q13606 314 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 PIK3CD-AS1Q5SR53 167 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 PRR27Q6MZM9 219 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 FAM231DQ6ZW35 169 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 C18orf15Q96N68 181 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 IL36BQ9NZH7 164 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 NAT8Q9UHE5 227 aa8.7□□□□□ -1.02
DDX55-210ENST00000543016 M0R2P5 195 aa8.69□□□□□ -1.02
DDX55-210ENST00000543016 DAD1P61803 113 aa8.69□□□□□ -1.02
DDX55-210ENST00000543016 C12orf74Q32Q52 190 aa8.69□□□□□ -1.02
DDX55-210ENST00000543016 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
DDX55-210ENST00000543016 MUC7Q8TAX7 377 aa8.69□□□□□ -1.02
DDX55-210ENST00000543016 RASL10AQ92737 203 aa8.69□□□□□ -1.02
DDX55-210ENST00000543016 MDFICQ9P1T7 246 aa8.69□□□□□ -1.02
DDX55-210ENST00000543016 COL7A1Q02388 2944 aa8.68□□□□□ -1.02
DDX55-210ENST00000543016 PGPEP1LA6NFU8 196 aa8.68□□□□□ -1.02
DDX55-210ENST00000543016 C3orf84H3BNL1 204 aa8.68□□□□□ -1.02
DDX55-210ENST00000543016 M0R036 132 aa8.68□□□□□ -1.02
DDX55-210ENST00000543016 SFTA3P0C7M3 94 aa8.68□□□□□ -1.02
DDX55-210ENST00000543016 C9orf85Q96MD7 179 aa8.68□□□□□ -1.02
DDX55-210ENST00000543016 CELA1Q9UNI1 258 aa8.68□□□□□ -1.02
DDX55-210ENST00000543016 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 TRAV10A0A0B4J240 114 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 K7EN84 100 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 CIDEAO60543 219 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
DDX55-210ENST00000543016 NANOS2P60321 138 aaKnown RBP8.67□□□□□ -1.02
DDX55-210ENST00000543016 PNRC1Q12796 327 aaPredicted RBP8.67□□□□□ -1.02
DDX55-210ENST00000543016 CT83Q5H943 113 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 COMMD7Q86VX2 200 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 NUDT10Q8NFP7 164 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 OR2D3Q8NGH3 330 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 NUDT11Q96G61 164 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 OSTCQ9NRP0 149 aa8.67□□□□□ -1.02
DDX55-210ENST00000543016 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
DDX55-210ENST00000543016 NUPR2A6NF83 97 aa8.66□□□□□ -1.02
DDX55-210ENST00000543016 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
DDX55-210ENST00000543016 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms