RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 NUPR1O60356 82 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 OR7C2O60412 319 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 IL4P05112 153 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 NPPCP23582 126 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 LINC00310P59036 64 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 KRTDAPP60985 99 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 RPL11P62913 178 aaKnown RBP5.3□□□□□ -1.56
LMO3-220ENST00000539232 SEC11AP67812 179 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 TDRG1Q3Y452 100 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 SPANXN5Q5MJ07 72 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 FFAR4Q5NUL3 377 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 STXBP6Q8NFX7 210 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 OR5A1Q8NGJ0 315 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 DCANP1Q8TF63 244 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 LINC00476Q8WZB0 136 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 UHRF2Q96PU4 802 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 RSG1Q9BU20 258 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 TMEM147Q9BVK8 224 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 RABAC1Q9UI14 185 aa5.3□□□□□ -1.56
LMO3-220ENST00000539232 C11orf94C9JXX5 98 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 TAX1BP3O14907 124 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 CRXO43186 299 aaPredicted RBP5.29□□□□□ -1.56
LMO3-220ENST00000539232 BUB3O43684 328 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 MPDU1O75352 247 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 ZNF688P0C7X2 276 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 C3orf79P0CE67 100 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 AMTP48728 403 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 HINT1P49773 126 aaPredicted RBP5.29□□□□□ -1.56
LMO3-220ENST00000539232 VWC2Q2TAL6 325 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 SAMD13Q5VXD3 122 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 RPP25LQ8N5L8 163 aaKnown RBP5.29□□□□□ -1.56
LMO3-220ENST00000539232 OR10G9Q8NGN4 311 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 OR10G7Q8NGN6 311 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 METTL26Q96S19 204 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 PSENENQ9NZ42 101 aa5.29□□□□□ -1.56
LMO3-220ENST00000539232 A0A0J9YWU9 116 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 A0A1W2PS18 150 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 J3QR89 54 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 DEFB4AO15263 64 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 SPRY2O43597 315 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 PMCHP20382 165 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 CDC34P49427 236 aaPredicted RBP5.28□□□□□ -1.56
LMO3-220ENST00000539232 LYZP61626 148 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 HIST1H1AQ02539 215 aaPredicted RBP5.28□□□□□ -1.56
LMO3-220ENST00000539232 SLC38A11Q08AI6 406 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 PSMG4Q5JS54 123 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 IGFL4Q6B9Z1 124 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 TMEM14EPQ6UXP3 125 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 THAP8Q8NA92 274 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 FER1L6-AS1Q8NA97 138 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 C11orf52Q96A22 123 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 RNF183Q96D59 192 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 RNF125Q96EQ8 232 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 C20orf173Q96LM9 149 aa5.28□□□□□ -1.56
LMO3-220ENST00000539232 A6NDN8 102 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 SOCS3O14543 225 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 PAGE4O60829 102 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 OR5AL1P0C617 328 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 BVES-AS1Q5T3Y7 98 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 GDF5OSQ5U4N7 250 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 SLC25A34Q6PIV7 304 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 NEGR1Q7Z3B1 354 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
LMO3-220ENST00000539232 IL17DQ8TAD2 202 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 TRGV9Q99603 122 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 OSTCQ9NRP0 149 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 CLEC5AQ9NY25 188 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 RFNGQ9Y644 331 aa5.27□□□□□ -1.57
LMO3-220ENST00000539232 DMBT1Q9UGM3 2413 aaPredicted RBP5.26□□□□□ -1.57
LMO3-220ENST00000539232 GRIFINA4D1Z8 144 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 TMEM189A5PLL7 270 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 GAGE10A6NGK3 116 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 SNURFLB1AK76 121 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 F6UB75 175 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 H3BRM9 83 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 LY6G6CO95867 125 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 CXorf1O96002 111 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 UBE2G1P62253 170 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 UFSP1Q6NVU6 142 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 PATE2Q6UY27 113 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 KIR2DL5BQ8NHK3 375 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 AP1S3Q96PC3 154 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 SIGMAR1Q99720 223 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 SPANXA1Q9NS26 97 aa5.26□□□□□ -1.57
LMO3-220ENST00000539232 TRAV2A0A0B4J234 112 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 TRAV8-2A0A0B4J237 113 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 ISLRO14498 428 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 CA1P00915 261 aaPredicted RBP5.25□□□□□ -1.57
LMO3-220ENST00000539232 IGKV3-20P01619 116 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 RBMY1A1P0DJD3 496 aaKnown RBP5.25□□□□□ -1.57
LMO3-220ENST00000539232 RBMY1CP0DJD4 496 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 ORM2P19652 201 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 HLA-DMBP28068 263 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 APOC4P55056 127 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 ATP5IP56385 69 aaPredicted RBP5.25□□□□□ -1.57
LMO3-220ENST00000539232 FXYD7P58549 80 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 PSG9Q00887 426 aa5.25□□□□□ -1.57
LMO3-220ENST00000539232 RBMY1FQ15415 496 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms