RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PPIFP30405 207 aaKnown RBP6.78□□□□□ -1.32
GGA3-202ENST00000538886 TCF24Q7RTU0 167 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 ZNF491Q8N8L2 437 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 RNF125Q96EQ8 232 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 IGF1P05019 195 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 EMP1P54849 157 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 TAS2R45P59539 299 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 ASPHD1Q5U4P2 390 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 TMEM136Q6ZRR5 245 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 SPATA12Q7Z6I5 190 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 SGK494Q96LW2 274 aa6.78□□□□□ -1.32
GGA3-202ENST00000538886 A0A1W2PPM0 123 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 WFDC2Q14508 124 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 LINC00305Q7Z4B0 112 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 SYT8Q8NBV8 401 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 C18orf32Q8TCD1 76 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 RAX2Q96IS3 184 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 DAZ1Q9NQZ3 744 aaKnown RBP6.77□□□□□ -1.33
GGA3-202ENST00000538886 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 NPIPB5A8MRT5 1133 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 SSBP2P81877 361 aaPredicted RBP6.77□□□□□ -1.33
GGA3-202ENST00000538886 COX19Q49B96 90 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 IBA57Q5T440 356 aaKnown RBP6.77□□□□□ -1.33
GGA3-202ENST00000538886 SFTA2Q6UW10 78 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 NDUFA11Q86Y39 141 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 FANCD2OSQ96PS1 177 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 ASCL2Q99929 193 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 H3BRM9 83 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 SYS1-DBNDD2H3BUS1 97 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 UBE2L3P68036 154 aaKnown RBP6.77□□□□□ -1.33
GGA3-202ENST00000538886 CENPWQ5EE01 88 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 UNQ9165/PRO28630Q6UXU0 137 aa6.77□□□□□ -1.33
GGA3-202ENST00000538886 NHP2Q9NX24 153 aaKnown RBP6.77□□□□□ -1.33
GGA3-202ENST00000538886 APOMO95445 188 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 PAX9P55771 341 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 POU2AF1Q16633 256 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 C2orf83Q53S99 150 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 TTC32Q5I0X7 151 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 PSMG4Q5JS54 123 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 AMTNQ6UX39 209 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 LINC00173Q6ZV60 143 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 NACAE9PAV3 2078 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 ZNF469Q96JG9 3925 aaPredicted RBP6.76□□□□□ -1.33
GGA3-202ENST00000538886 TRBV20-1A0A075B6N2 111 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 NDUFA7O95182 113 aa6.76□□□□□ -1.33
GGA3-202ENST00000538886 EGR2P11161 476 aaPredicted RBP6.75□□□□□ -1.33
GGA3-202ENST00000538886 CSN1S1P47710 185 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 OR9G4Q8NGQ1 327 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 AAMDCQ9H7C9 122 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 MRPL36Q9P0J6 103 aaKnown RBP6.75□□□□□ -1.33
GGA3-202ENST00000538886 TRBV20OR9-2A0A075B6H5 130 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 K7EIM0 57 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 PSMB8P28062 276 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 ZNF138P52744 262 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 FXYD7P58549 80 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 NEGR1Q7Z3B1 354 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 IGLV11-55A0A075B6I3 123 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 TMSB15BA0A087X1C1 80 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 A0A1W2PRE2 83 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 H3BMG7 143 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 SNRPD3P62318 126 aaKnown RBP6.75□□□□□ -1.33
GGA3-202ENST00000538886 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
GGA3-202ENST00000538886 OR1L4Q8NGR5 311 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 TPPP3Q9BW30 176 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 TENM1Q9UKZ4 2725 aa6.75□□□□□ -1.33
GGA3-202ENST00000538886 TRAV5A0A0B4J249 113 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 H3BVH4 76 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 K7ERJ3 54 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 MYCNOSP40205 109 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 FAM162BQ5T6X4 162 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 C4orf3Q8WVX3 66 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 NPCDR1Q9BY65 106 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 GP9P14770 177 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 DEFB131AP59861 70 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 ZFAND6Q6FIF0 208 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 C11orf1Q9H5F2 150 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 FBN1P35555 2871 aaKnown RBP6.74□□□□□ -1.33
GGA3-202ENST00000538886 TET2Q6N021 2002 aaPredicted RBP6.74□□□□□ -1.33
GGA3-202ENST00000538886 TRAV9-1A0A075B6T8 112 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 TMEM89A2RUT3 159 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 SPAG8Q99932 426 aaPredicted RBP6.74□□□□□ -1.33
GGA3-202ENST00000538886 C1QTNF4Q9BXJ3 329 aa6.74□□□□□ -1.33
GGA3-202ENST00000538886 CRYGBP07316 175 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 CTSGP08311 255 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 PRSS3P2Q8NHM4 247 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 K7EMI3 77 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 EIF4EBP1Q13541 118 aaPredicted RBP6.73□□□□□ -1.33
GGA3-202ENST00000538886 APRG1Q8IVJ8 170 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 STHQ8IWL8 128 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 NDFIP1Q9BT67 221 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 OR11H12B2RN74 326 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 C9orf66Q5T8R8 295 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 ZNF502Q8TBZ5 544 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 CCDC140Q96MF4 163 aa6.73□□□□□ -1.33
GGA3-202ENST00000538886 CXorf1O96002 111 aa6.72□□□□□ -1.33
GGA3-202ENST00000538886 MT-ATP8P03928 68 aa6.72□□□□□ -1.33
GGA3-202ENST00000538886 SLC25A5P05141 298 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms