RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CXorf65A6NEN9 183 aa12.54□□□□□ -0.4
NXF1-216ENST00000533499 COMMD7Q86VX2 200 aa12.54□□□□□ -0.4
NXF1-216ENST00000533499 MLST8Q9BVC4 326 aa12.54□□□□□ -0.4
NXF1-216ENST00000533499 SMDT1Q9H4I9 107 aa12.54□□□□□ -0.4
NXF1-216ENST00000533499 NOP10Q9NPE3 64 aaKnown RBP12.54□□□□□ -0.4
NXF1-216ENST00000533499 STAB2Q8WWQ8 2551 aa12.54□□□□□ -0.4
NXF1-216ENST00000533499 B4DEV8 164 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 C9JCJ5 164 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 IGLV2-8P01709 118 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 TYMSP04818 313 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 SOHLH1Q5JUK2 328 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 FAM222AQ5U5X8 452 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 COX8CQ7Z4L0 72 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 OCC1Q8TAD7 63 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 C11orf45Q8TAV5 145 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 RNASE8Q8TDE3 154 aaKnown RBP12.53□□□□□ -0.4
NXF1-216ENST00000533499 LINC00467Q9BRT7 94 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 CELA1Q9UNI1 258 aa12.53□□□□□ -0.4
NXF1-216ENST00000533499 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
NXF1-216ENST00000533499 NDUFS6O75380 124 aaKnown RBP12.52□□□□□ -0.41
NXF1-216ENST00000533499 SPART-AS1P0CW21 52 aa12.52□□□□□ -0.41
NXF1-216ENST00000533499 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
NXF1-216ENST00000533499 BIN3Q9NQY0 253 aa12.52□□□□□ -0.41
NXF1-216ENST00000533499 MDFICQ9P1T7 246 aa12.52□□□□□ -0.41
NXF1-216ENST00000533499 IGKV3D-20A0A0C4DH25 116 aa12.51□□□□□ -0.41
NXF1-216ENST00000533499 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
NXF1-216ENST00000533499 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
NXF1-216ENST00000533499 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
NXF1-216ENST00000533499 NANOS2P60321 138 aaKnown RBP12.51□□□□□ -0.41
NXF1-216ENST00000533499 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
NXF1-216ENST00000533499 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
NXF1-216ENST00000533499 TMEM241Q24JQ0 296 aa12.5□□□□□ -0.41
NXF1-216ENST00000533499 TDRG1Q3Y452 100 aa12.5□□□□□ -0.41
NXF1-216ENST00000533499 FAM74A3Q4VXF1 159 aa12.5□□□□□ -0.41
NXF1-216ENST00000533499 DKK2Q9UBU2 259 aa12.5□□□□□ -0.41
NXF1-216ENST00000533499 TRGV1A0A0A0MS02 117 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 PLAC8L1A1L4L8 177 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 KRBOX1C9JBD0 128 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 K7EN84 100 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 P01737 135 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 ASIPP42127 132 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 DAD1P61803 113 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 ADIRFQ15847 76 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 C11orf72Q8NBR9 251 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 IL17DQ8TAD2 202 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 WWC2-AS2Q96NR7 200 aa12.49□□□□□ -0.41
NXF1-216ENST00000533499 GAGE12BA1L429 117 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 GAGE7O76087 117 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 TCL1AP56279 114 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 LINC01559Q495D7 138 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 IBA57Q5T440 356 aaKnown RBP12.48□□□□□ -0.41
NXF1-216ENST00000533499 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 RNASE7Q9H1E1 156 aaKnown RBP12.48□□□□□ -0.41
NXF1-216ENST00000533499 MRPL16Q9NX20 251 aaKnown RBP12.48□□□□□ -0.41
NXF1-216ENST00000533499 NAT8Q9UHE5 227 aa12.48□□□□□ -0.41
NXF1-216ENST00000533499 TEX48A0A1B0GUV7 120 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 LINC00862A6NCI5 91 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 H3BVH4 76 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 HTN3P15516 51 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 ERVFC1-1P60608 527 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 UQCC3Q6UW78 93 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 NUDT10Q8NFP7 164 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 NUDT11Q96G61 164 aa12.47□□□□□ -0.41
NXF1-216ENST00000533499 Q6ZTI0 123 aa12.46□□□□□ -0.41
NXF1-216ENST00000533499 LINC01551Q86U37 167 aa12.46□□□□□ -0.41
NXF1-216ENST00000533499 LY96Q9Y6Y9 160 aa12.46□□□□□ -0.41
NXF1-216ENST00000533499 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
NXF1-216ENST00000533499 C19orf71A6NCJ1 209 aa12.45□□□□□ -0.42
NXF1-216ENST00000533499 GATCO43716 136 aaKnown RBP12.45□□□□□ -0.42
NXF1-216ENST00000533499 GZMBP10144 247 aa12.45□□□□□ -0.42
NXF1-216ENST00000533499 RPL23P62829 140 aaKnown RBP12.45□□□□□ -0.42
NXF1-216ENST00000533499 DAZ2Q13117 558 aaKnown RBP12.45□□□□□ -0.42
NXF1-216ENST00000533499 C12orf74Q32Q52 190 aa12.45□□□□□ -0.42
NXF1-216ENST00000533499 ZFAND6Q6FIF0 208 aa12.45□□□□□ -0.42
NXF1-216ENST00000533499 SPXQ9BT56 116 aa12.45□□□□□ -0.42
NXF1-216ENST00000533499 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
NXF1-216ENST00000533499 F8W036 122 aa12.44□□□□□ -0.42
NXF1-216ENST00000533499 ARMS2P0C7Q2 107 aa12.44□□□□□ -0.42
NXF1-216ENST00000533499 RPS20P60866 119 aaKnown RBP12.44□□□□□ -0.42
NXF1-216ENST00000533499 SSTP61278 116 aa12.44□□□□□ -0.42
NXF1-216ENST00000533499 Q6ZTC4 211 aa12.44□□□□□ -0.42
NXF1-216ENST00000533499 RPP21Q9H633 154 aaKnown RBP12.44□□□□□ -0.42
NXF1-216ENST00000533499 M0R2P5 195 aa12.43□□□□□ -0.42
NXF1-216ENST00000533499 PHLDA3Q9Y5J5 127 aa12.43□□□□□ -0.42
NXF1-216ENST00000533499 MUC21A0A0G2JKD1 596 aa12.42□□□□□ -0.42
NXF1-216ENST00000533499 MUC21A0A140T8X8 626 aa12.42□□□□□ -0.42
NXF1-216ENST00000533499 TMEM218A2RU14 115 aa12.42□□□□□ -0.42
NXF1-216ENST00000533499 XKRY2A2RUG3 117 aa12.42□□□□□ -0.42
NXF1-216ENST00000533499 SPINK4O60575 86 aa12.42□□□□□ -0.42
NXF1-216ENST00000533499 RNASE3P12724 160 aaKnown RBP12.42□□□□□ -0.42
NXF1-216ENST00000533499 C15orf54Q8N8G6 183 aa12.42□□□□□ -0.42
NXF1-216ENST00000533499 MUC7Q8TAX7 377 aa12.42□□□□□ -0.42
NXF1-216ENST00000533499 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms