RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CRIP1P50238 77 aa17.61■□□□□ 0.41
USP48-214ENST00000532737 IBA57Q5T440 356 aaKnown RBP17.61■□□□□ 0.41
USP48-214ENST00000532737 TMEM183AQ8IXX5 376 aa17.61■□□□□ 0.41
USP48-214ENST00000532737 MDFICQ9P1T7 246 aa17.61■□□□□ 0.41
USP48-214ENST00000532737 TAGLN2P37802 199 aaKnown RBP17.6■□□□□ 0.41
USP48-214ENST00000532737 TCL1AP56279 114 aa17.6■□□□□ 0.41
USP48-214ENST00000532737 DERL1Q9BUN8 251 aa17.6■□□□□ 0.41
USP48-214ENST00000532737 KLK5Q9Y337 293 aaPredicted RBP17.6■□□□□ 0.41
USP48-214ENST00000532737 DEFB131BA0A096LNP1 70 aa17.59■□□□□ 0.41
USP48-214ENST00000532737 PDE6DO43924 150 aa17.59■□□□□ 0.41
USP48-214ENST00000532737 RPL35P42766 123 aaKnown RBP17.59■□□□□ 0.41
USP48-214ENST00000532737 LINC00612Q8N6U2 182 aa17.59■□□□□ 0.41
USP48-214ENST00000532737 NHLRC2Q8NBF2 726 aa17.59■□□□□ 0.41
USP48-214ENST00000532737 PCNPQ8WW12 178 aaKnown RBP17.59■□□□□ 0.41
USP48-214ENST00000532737 EPPK1P58107 5090 aaKnown RBP17.59■□□□□ 0.41
USP48-214ENST00000532737 TRGV11A0A075B6L2 103 aa17.58■□□□□ 0.4
USP48-214ENST00000532737 FABP5P3A8MUU1 101 aa17.58■□□□□ 0.4
USP48-214ENST00000532737 ZNF415Q09FC8 603 aa17.58■□□□□ 0.4
USP48-214ENST00000532737 BAGE2Q86Y30 109 aa17.58■□□□□ 0.4
USP48-214ENST00000532737 KCNS1Q96KK3 526 aa17.58■□□□□ 0.4
USP48-214ENST00000532737 GAGE12BA1L429 117 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 RBFOX3A6NFN3 312 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 GAGE7O76087 117 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 TYMSP04818 313 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 GAGE12FP0CL80 117 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 GAGE12GP0CL81 117 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 GAGE12IP0CL82 117 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 Q6ZTI0 123 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 SDF2L1Q9HCN8 221 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 MED9Q9NWA0 146 aa17.57■□□□□ 0.4
USP48-214ENST00000532737 IGHV3-16A0A0C4DH30 117 aa17.56■□□□□ 0.4
USP48-214ENST00000532737 HTN3P15516 51 aa17.56■□□□□ 0.4
USP48-214ENST00000532737 MLST8Q9BVC4 326 aa17.56■□□□□ 0.4
USP48-214ENST00000532737 RAB19A4D1S5 217 aa17.55■□□□□ 0.4
USP48-214ENST00000532737 SPINK4O60575 86 aa17.55■□□□□ 0.4
USP48-214ENST00000532737 SH2D1AO60880 128 aa17.55■□□□□ 0.4
USP48-214ENST00000532737 ZNF506Q5JVG8 444 aa17.55■□□□□ 0.4
USP48-214ENST00000532737 TRGV1A0A0A0MS02 117 aa17.54■□□□□ 0.4
USP48-214ENST00000532737 IGKV3D-20A0A0C4DH25 116 aa17.54■□□□□ 0.4
USP48-214ENST00000532737 ZNF674Q2M3X9 581 aa17.54■□□□□ 0.4
USP48-214ENST00000532737 FAM162BQ5T6X4 162 aa17.54■□□□□ 0.4
USP48-214ENST00000532737 PLECQ15149 4684 aaKnown RBP17.53■□□□□ 0.4
USP48-214ENST00000532737 IGLL5B9A064 214 aa17.53■□□□□ 0.4
USP48-214ENST00000532737 CENPWQ5EE01 88 aa17.53■□□□□ 0.4
USP48-214ENST00000532737 TOR2AQ5JU69 321 aa17.53■□□□□ 0.4
USP48-214ENST00000532737 MRPL16Q9NX20 251 aaKnown RBP17.53■□□□□ 0.4
USP48-214ENST00000532737 ATP5G1P05496 136 aa17.52■□□□□ 0.4
USP48-214ENST00000532737 FAM210AQ96ND0 272 aa17.52■□□□□ 0.4
USP48-214ENST00000532737 SPXQ9BT56 116 aa17.52■□□□□ 0.4
USP48-214ENST00000532737 ORM1P02763 201 aa17.51■□□□□ 0.39
USP48-214ENST00000532737 LGALS9BQ3B8N2 356 aa17.51■□□□□ 0.39
USP48-214ENST00000532737 M0R036 132 aa17.5■□□□□ 0.39
USP48-214ENST00000532737 IGLV2-8P01709 118 aa17.5■□□□□ 0.39
USP48-214ENST00000532737 EIF5A2Q9GZV4 153 aaKnown RBP17.5■□□□□ 0.39
USP48-214ENST00000532737 BIRC6Q9NR09 4857 aa17.49■□□□□ 0.39
USP48-214ENST00000532737 TRBV20OR9-2A0A075B6H5 130 aa17.49■□□□□ 0.39
USP48-214ENST00000532737 IGHV4-4A0A075B6R2 117 aa17.49■□□□□ 0.39
USP48-214ENST00000532737 KRBOX1C9JBD0 128 aa17.49■□□□□ 0.39
USP48-214ENST00000532737 TRGV2A0A075B6R0 118 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 B4DEV8 164 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 F5H768 121 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 TMEM250H0YL14 139 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 GNG4P50150 75 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 ZNF575Q86XF7 245 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 C18orf15Q96N68 181 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 APLNQ9ULZ1 77 aa17.48■□□□□ 0.39
USP48-214ENST00000532737 HYDINQ4G0P3 5121 aa17.47■□□□□ 0.39
USP48-214ENST00000532737 PRR27Q6MZM9 219 aa17.47■□□□□ 0.39
USP48-214ENST00000532737 C9orf85Q96MD7 179 aa17.47■□□□□ 0.39
USP48-214ENST00000532737 PGPEP1LA6NFU8 196 aa17.46■□□□□ 0.39
USP48-214ENST00000532737 M0R2P5 195 aa17.46■□□□□ 0.39
USP48-214ENST00000532737 RNASE3P12724 160 aaKnown RBP17.46■□□□□ 0.39
USP48-214ENST00000532737 LINC01559Q495D7 138 aa17.46■□□□□ 0.39
USP48-214ENST00000532737 RASL10AQ92737 203 aa17.46■□□□□ 0.39
USP48-214ENST00000532737 TMSB15BA0A087X1C1 80 aa17.45■□□□□ 0.38
USP48-214ENST00000532737 GRIFINA4D1Z8 144 aa17.45■□□□□ 0.38
USP48-214ENST00000532737 HOXA5P20719 270 aa17.45■□□□□ 0.38
USP48-214ENST00000532737 TCTAP57738 103 aa17.45■□□□□ 0.38
USP48-214ENST00000532737 TMEM88Q6PEY1 159 aa17.45■□□□□ 0.38
USP48-214ENST00000532737 FAM210BQ96KR6 192 aa17.45■□□□□ 0.38
USP48-214ENST00000532737 PARLQ9H300 379 aa17.45■□□□□ 0.38
USP48-214ENST00000532737 SRP19P09132 144 aaKnown RBP17.44■□□□□ 0.38
USP48-214ENST00000532737 MGST1P10620 155 aaKnown RBP17.44■□□□□ 0.38
USP48-214ENST00000532737 ASIPP42127 132 aa17.44■□□□□ 0.38
USP48-214ENST00000532737 SMIM12Q96EX1 92 aa17.44■□□□□ 0.38
USP48-214ENST00000532737 NDUFS6O75380 124 aaKnown RBP17.43■□□□□ 0.38
USP48-214ENST00000532737 S100A4P26447 101 aaKnown RBP17.43■□□□□ 0.38
USP48-214ENST00000532737 CEBPGP53567 150 aa17.43■□□□□ 0.38
USP48-214ENST00000532737 RPL19P84098 196 aaKnown RBP17.43■□□□□ 0.38
USP48-214ENST00000532737 DNLZQ5SXM8 178 aa17.43■□□□□ 0.38
USP48-214ENST00000532737 NDUFAF3Q9BU61 184 aa17.43■□□□□ 0.38
USP48-214ENST00000532737 C9JCJ5 164 aa17.42■□□□□ 0.38
USP48-214ENST00000532737 IGHV3-53P01767 116 aa17.42■□□□□ 0.38
USP48-214ENST00000532737 IFITM2Q01629 132 aa17.42■□□□□ 0.38
USP48-214ENST00000532737 OR5I1Q13606 314 aa17.42■□□□□ 0.38
USP48-214ENST00000532737 POM121L12Q8N7R1 296 aa17.41■□□□□ 0.38
USP48-214ENST00000532737 OCC1Q8TAD7 63 aa17.41■□□□□ 0.38
USP48-214ENST00000532737 H3BVH4 76 aa17.4■□□□□ 0.38
USP48-214ENST00000532737 ARMS2P0C7Q2 107 aa17.4■□□□□ 0.38
USP48-214ENST00000532737 SRSF3P84103 164 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms