RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 FAM19A2Q8N3H0 131 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 PPP3R2Q96LZ3 170 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 NAA60Q9H7X0 242 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 SCN3BQ9NY72 215 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 ORMDL1Q9P0S3 153 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 MGAMO43451 1857 aa1.71□□□□□ -2.14
USP47-211ENST00000531513 MRC2Q9UBG0 1479 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 IGKV3D-7A0A0C4DH55 119 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 IGKV3OR2-268A0A0C4DH90 116 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 TRBV6-4A0A1B0GX49 114 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 IGHV3-33P01772 117 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 SNX29P2Q8IUI4 249 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 VSTM2AQ8TAG5 236 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 CDC42SE1Q9NRR8 79 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 SNURFQ9Y675 71 aa1.7□□□□□ -2.14
USP47-211ENST00000531513 FREM1Q5H8C1 2179 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 CR1P17927 2039 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
USP47-211ENST00000531513 PCDH15Q96QU1 1955 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 F8W1H4 67 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 RBP2P50120 134 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 C5orf17Q8NAS9 161 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 C14orf144Q96I85 54 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 BOKQ9UMX3 212 aaPredicted RBP1.69□□□□□ -2.14
USP47-211ENST00000531513 LAMB2P55268 1798 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 CCNB3Q8WWL7 1395 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 CECR2Q9BXF3 1484 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 MBD5Q9P267 1494 aa1.69□□□□□ -2.14
USP47-211ENST00000531513 ADGRB2O60241 1585 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 SMARCA2P51531 1590 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 SPEF2Q9C093 1822 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 LOC110117498A0A087WWA1 95 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 H3BRM9 83 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 M0R2N4 97 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 SNAPC5O75971 98 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 TNFP01375 233 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 S100A8P05109 93 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 ADCYAP1P18509 176 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 PPP3R1P63098 170 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 MPV17LQ2QL34 196 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 Q56UQ5 140 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 OR2T2Q6IF00 324 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 C3orf62Q6ZUJ4 267 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 SLC25A26Q70HW3 274 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 PLPP5Q8NEB5 264 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 DYNLRB2Q8TF09 96 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 PPDPFLQ8WWR9 84 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 AGPAT4-IT1Q9H0P7 198 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 IER3IP1Q9Y5U9 82 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 CDK5RAP2Q96SN8 1893 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 CEP192Q8TEP8 1941 aa1.68□□□□□ -2.14
USP47-211ENST00000531513 USP54Q70EL1 1684 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 PLXNA4Q9HCM2 1894 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 IGKV3-7A0A075B6H7 116 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 IGKV2-40A0A087WW87 121 aaPredicted RBP1.67□□□□□ -2.14
USP47-211ENST00000531513 PIGBOS1A0A0B4J2F0 54 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 LOC100130705A0A1B0GUX0 176 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 A0A1W2PRS3 328 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 CCDC179H3BU77 68 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 M0R129 80 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 GEMIN2O14893 280 aaKnown RBP1.67□□□□□ -2.14
USP47-211ENST00000531513 INE1O15225 51 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 NUPR1O60356 82 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 IGKV2D-40P01614 121 aaPredicted RBP1.67□□□□□ -2.14
USP47-211ENST00000531513 TPPP2P59282 170 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 MIC13Q5XKP0 118 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 LINC00299Q6ZSB3 139 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 ZCCHC23Q6ZST2 131 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 ZFP30Q9Y2G7 519 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 FANCMQ8IYD8 2048 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 CFTRP13569 1480 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 ADGRB1O14514 1584 aa1.67□□□□□ -2.14
USP47-211ENST00000531513 ERBINQ96RT1 1412 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 WDR97A6NE52 1622 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 APOC4-APOC2K7ER74 178 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 APOC2P02655 101 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 PIPP12273 146 aaPredicted RBP1.66□□□□□ -2.14
USP47-211ENST00000531513 RHOHQ15669 191 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 DEFB119Q8N690 84 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 SPTSSAQ969W0 71 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 SEC11CQ9BY50 192 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 COA4Q9NYJ1 87 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 SERP1Q9Y6X1 66 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 MED12LQ86YW9 2145 aa1.66□□□□□ -2.14
USP47-211ENST00000531513 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.14
USP47-211ENST00000531513 A2ML1A8K2U0 1454 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 KTN1Q86UP2 1357 aaKnown RBP1.65□□□□□ -2.15
USP47-211ENST00000531513 IGLV3-32A0A0A0MS00 114 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 IGKV2-29A2NJV5 120 aaPredicted RBP1.65□□□□□ -2.15
USP47-211ENST00000531513 PITX3O75364 302 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 NDUFB6O95139 128 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 POLR2JP52435 117 aaKnown RBP1.65□□□□□ -2.15
USP47-211ENST00000531513 SPANXN1Q5VSR9 72 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 C12orf73Q69YU5 71 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 GTF2H5Q6ZYL4 71 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 C8orf59Q8N0T1 100 aaPredicted RBP1.65□□□□□ -2.15
USP47-211ENST00000531513 ACBD7Q8N6N7 88 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 RPRMQ9NS64 109 aa1.65□□□□□ -2.15
USP47-211ENST00000531513 TNRC6BQ9UPQ9 1833 aaKnown RBP1.65□□□□□ -2.15
USP47-211ENST00000531513 VPS8Q8N3P4 1428 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms