RNA–Protein interactions for RNA: ENST00000527612.1

PPFIA1-209, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-209ENST00000527612 PAX4O43316 350 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 CDK2AP2O75956 126 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 TCRAP04437 139 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 ZNF80P51504 273 aaPredicted RBP4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 ZNF726P1Q15940 193 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 RPL7L1Q6DKI1 246 aaKnown RBP4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 FAM159AQ6UWV7 190 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 TMEM75Q8N9X5 138 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 C5orf17Q8NAS9 161 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 CMTM2Q8TAZ6 248 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 ASB13Q8WXK3 278 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 SGK494Q96LW2 274 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 MED28Q9H204 178 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 TNFSF18Q9UNG2 199 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 HHLA3Q9XRX5 114 aa4.64□□□□□ -1.67
PPFIA1-209ENST00000527612 TRAV4A0A0B4J268 109 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 TRAV21A0A0B4J279 112 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 LOC100131303A0A0U1RQF7 123 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 SERTM2A0A1B0GWG4 89 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 SIVA1O15304 175 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 SERF2P84101 59 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 FAM74A1Q5RGS3 127 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 SPATA12Q7Z6I5 190 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 WFDC10BQ8IUB3 73 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 IQCF2Q8IXL9 164 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 SPXQ9BT56 116 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 TREM1Q9NP99 234 aa4.63□□□□□ -1.67
PPFIA1-209ENST00000527612 FXYD6-FXYD2A0A087WZ82 144 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 TRGV4A0A0C4DH28 118 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 M0R2P5 195 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 GNRH2O43555 120 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 CXorf1O96002 111 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 GCGP01275 180 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 GYPEP15421 78 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 GATA1P15976 413 aaPredicted RBP4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 MRPL23Q16540 153 aaKnown RBP4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 LYPD5Q6UWN5 251 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 DPPA3Q6W0C5 159 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 NEGR1Q7Z3B1 354 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 Q86TA4 180 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 CYB561D1Q8N8Q1 229 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 OR2T35Q8NGX2 323 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 C9orf85Q96MD7 179 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 SDF2L1Q9HCN8 221 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 TMEM167BQ9NRX6 74 aa4.62□□□□□ -1.67
PPFIA1-209ENST00000527612 CTXND1A0A1B0GTU2 59 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 A0A1W2PRE2 83 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 C9JCJ5 164 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 MBP02144 154 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 PFN1P07737 140 aaKnown RBP4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 DNAH10OSP0CZ25 163 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 LINC00694P0DN24 101 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 RNASE3P12724 160 aaKnown RBP4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 SRIP30626 198 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 FLI1Q01543 452 aaPredicted RBP4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 SLAQ13239 276 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 ZNF506Q5JVG8 444 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 KCNS1Q96KK3 526 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 NDFIP1Q9BT67 221 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 EPDR1Q9UM22 224 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 PSG8Q9UQ74 426 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 TNFRSF18Q9Y5U5 241 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 ARL2-SNX15V9GYD0 113 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 SRRM2Q9UQ35 2752 aaKnown RBP4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
PPFIA1-209ENST00000527612 IGKV3D-20A0A0C4DH25 116 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 FBLL1A6NHQ2 334 aaKnown RBP4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 ARPC5O15511 151 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 ORM1P02763 201 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 FUSP35637 526 aaKnown RBP eCLIP4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 FGF8P55075 233 aaPredicted RBP4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 SUMO1P63165 101 aaKnown RBP4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 RGS21Q2M5E4 152 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 SMUG1Q53HV7 270 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 CFAP126Q5VTH2 177 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 PRNTQ86SH4 94 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 SLC25A29Q8N8R3 303 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 INO80EQ8NBZ0 244 aaPredicted RBP4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 OR4C5Q8NGB2 326 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 PCNPQ8WW12 178 aaKnown RBP4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 ACTR3CQ9C0K3 210 aaPredicted RBP4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 CYTL1Q9NRR1 136 aa4.6□□□□□ -1.67
PPFIA1-209ENST00000527612 BORCS7-ASMTA0A0B4J1R7 106 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 TRAV34A0A0B4J273 112 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 MAP1LC3B2A6NCE7 125 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 FAM74A7A6NL05 159 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 SMLR1H3BR10 107 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 K7EQM0 130 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 PEX7O00628 323 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 TAAR5O14804 337 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 RS1O15537 224 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 FHITP49789 147 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 TIRAPP58753 221 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 UBE2G2P60604 165 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 ZNF876PQ49A33 203 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 ZFP69Q49AA0 526 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 UFSP1Q6NVU6 142 aa4.59□□□□□ -1.67
PPFIA1-209ENST00000527612 COX8CQ7Z4L0 72 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms