RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 IFNA6P05013 189 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 CRHP06850 196 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 CDC42P60953 191 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 LINC00322Q6ZN03 302 aaPredicted RBP-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 HIST3H2BBQ8N257 126 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 OR4S1Q8NGB4 309 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 PIGXQ8TBF5 258 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 MT1LQ93083 61 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 ERGIC3Q9Y282 383 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 U3KQA8 63 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 ANKRD36A6QL64 1941 aa-0.36□□□□□ -2.47
SCARNA1-201ENST00000517138 TRAV26-2A0A0B4J265 109 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 H0Y980 276 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 Q6Q795 121 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 Q6ZS92 163 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 OR13D1Q8NGV5 346 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 GPR146Q96CH1 333 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 PRRT1Q99946 306 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 SLC39A9Q9NUM3 307 aa-0.37□□□□□ -2.47
SCARNA1-201ENST00000517138 MYO3BQ8WXR4 1341 aa-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 TRBV6-4A0A1B0GX49 114 aa-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 EEF1E1-BLOC1S5C9J1V9 151 aa-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 OR2B3O76000 313 aa-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 PROSCO94903 275 aa-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 RAB5BP61020 215 aa-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 TFAMQ00059 246 aaKnown RBP-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 OR51V1Q9H2C8 321 aa-0.38□□□□□ -2.47
SCARNA1-201ENST00000517138 TRAV9-1A0A075B6T8 112 aa-0.39□□□□□ -2.47
SCARNA1-201ENST00000517138 A0A1B0GV50 99 aa-0.39□□□□□ -2.47
SCARNA1-201ENST00000517138 DPRXA6NFQ7 191 aa-0.39□□□□□ -2.47
SCARNA1-201ENST00000517138 CCL16O15467 120 aa-0.39□□□□□ -2.47
SCARNA1-201ENST00000517138 TCL1AP56279 114 aa-0.39□□□□□ -2.47
SCARNA1-201ENST00000517138 MED21Q13503 144 aa-0.39□□□□□ -2.47
SCARNA1-201ENST00000517138 DEFB108AA8MXU0 73 aa-0.4□□□□□ -2.47
SCARNA1-201ENST00000517138 ANGPTL5Q86XS5 388 aa-0.4□□□□□ -2.47
SCARNA1-201ENST00000517138 TOMM6Q96B49 74 aa-0.4□□□□□ -2.47
SCARNA1-201ENST00000517138 NIPSNAP1Q9BPW8 284 aa-0.4□□□□□ -2.47
SCARNA1-201ENST00000517138 TMEM14CQ9P0S9 112 aa-0.4□□□□□ -2.47
SCARNA1-201ENST00000517138 V9GYY5 206 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA1-201ENST00000517138 NBDYA0A0U1RRE5 68 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 FAAHO00519 579 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 HLA-DRB1P01911 266 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 CCL4P13236 92 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 TCTAP57738 103 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 EIF3IQ13347 325 aaKnown RBP-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 FAM74A1Q5RGS3 127 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 WFDC5Q8TCV5 224 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 C4orf3Q8WVX3 66 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 FAM103A1Q9BTL3 118 aaKnown RBP-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 KIFC1Q9BW19 673 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 FGFR1OP2Q9NVK5 253 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 SLC35A3Q9Y2D2 325 aa-0.41□□□□□ -2.48
SCARNA1-201ENST00000517138 ROCK2O75116 1388 aaKnown RBP-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 MED23Q9ULK4 1368 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 OR2J2O76002 312 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 C1QBP02746 253 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 RPS20P60866 119 aaKnown RBP-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 EXOC3-AS1Q8N2X6 119 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 TMEM86BQ8N661 226 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 DDI1Q8WTU0 396 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 DPH3Q96FX2 82 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 COMMD5Q9GZQ3 224 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 OSTCQ9NRP0 149 aa-0.42□□□□□ -2.48
SCARNA1-201ENST00000517138 A0A087WTM6 91 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 EXOC1LA0A1B0GW35 172 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 IFNA10P01566 189 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 IGLV3-1P01715 115 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 APOEP02649 317 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 MAGEA2P43356 314 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 BRMS1LQ5PSV4 323 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 LINC00575Q6W349 94 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 LYG2Q86SG7 212 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 NDUFA11Q86Y39 141 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 PLPP5Q8NEB5 264 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 SLC35B4Q969S0 331 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 TAS2R7Q9NYW3 318 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 PKIGQ9Y2B9 76 aa-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.43□□□□□ -2.48
SCARNA1-201ENST00000517138 OR5G3P0C626 314 aa-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 SNRPD2P62316 118 aaKnown RBP-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 UBE2DNLQ8IWF7 75 aa-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 LINC00301Q8NCQ3 95 aa-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 ITFG2Q969R8 447 aa-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 ATP6V1G3Q96LB4 118 aa-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 PPP1R2P1Q96PQ5 205 aa-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 UBAP1Q9NZ09 502 aa-0.44□□□□□ -2.48
SCARNA1-201ENST00000517138 RPS29P62273 56 aaKnown RBP-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 ESRGQ1W209 222 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 KRTAP19-5Q3LI72 72 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 LINC01554Q52M75 96 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 LPCAT3Q6P1A2 487 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 CD200R1LQ6Q8B3 271 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 SPINK6Q6UWN8 80 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 FAM9CQ8IZT9 166 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 OR8D4Q8NGM9 314 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 TCEAL4Q96EI5 215 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 PRTFDC1Q9NRG1 225 aa-0.45□□□□□ -2.48
SCARNA1-201ENST00000517138 IGHV1-58A0A0C4DH39 117 aa-0.46□□□□□ -2.48
SCARNA1-201ENST00000517138 TMEM114B3SHH9 223 aa-0.46□□□□□ -2.48
SCARNA1-201ENST00000517138 RPL5P46777 297 aaKnown RBP-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms