RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 IGLV2-8P01709 118 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-209ENST00000513148 MIC13Q5XKP0 118 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 TRGV9Q99603 122 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 MEGF8Q7Z7M0 2845 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 IGHV3-66A0A0C4DH42 116 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 A0A1W2PRE2 83 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 K7EMT4 169 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 IGF2BP2-AS1Q96M15 143 aa12.44□□□□□ -0.42
HMGCL-209ENST00000513148 RNASE7Q9H1E1 156 aaKnown RBP12.44□□□□□ -0.42
HMGCL-209ENST00000513148 H3BRM9 83 aa12.43□□□□□ -0.42
HMGCL-209ENST00000513148 GATA2P23769 480 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-209ENST00000513148 DEFB114Q30KQ6 69 aa12.43□□□□□ -0.42
HMGCL-209ENST00000513148 NHLRC2Q8NBF2 726 aa12.43□□□□□ -0.42
HMGCL-209ENST00000513148 GRAMD2BQ96HH9 432 aa12.43□□□□□ -0.42
HMGCL-209ENST00000513148 PRR25Q96S07 402 aa12.43□□□□□ -0.42
HMGCL-209ENST00000513148 IGHV7-4-1A0A0J9YVY3 117 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 APOHP02749 345 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-209ENST00000513148 LYZP61626 148 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 TEPPQ6URK8 271 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 METTL26Q96S19 204 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 C8orf88P0DMB2 117 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 PRR20EP86478 221 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 PRR20CP86479 221 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 PRR20DP86480 221 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 PRR20BP86481 221 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 PRR20AP86496 221 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 OR5A1Q8NGJ0 315 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 OR1B1Q8NGR6 318 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 RHPN1-AS1Q9BWJ2 59 aa12.42□□□□□ -0.42
HMGCL-209ENST00000513148 ZNF256Q9Y2P7 627 aaPredicted RBP12.42□□□□□ -0.42
HMGCL-209ENST00000513148 C7orf71A4D174 169 aa12.41□□□□□ -0.42
HMGCL-209ENST00000513148 C9orf118A6NHY6 69 aa12.41□□□□□ -0.42
HMGCL-209ENST00000513148 TMEM61Q8N0U2 210 aa12.41□□□□□ -0.42
HMGCL-209ENST00000513148 CHEK1O14757 476 aa12.4□□□□□ -0.42
HMGCL-209ENST00000513148 SPINK4O60575 86 aa12.4□□□□□ -0.42
HMGCL-209ENST00000513148 COX8AP10176 69 aa12.4□□□□□ -0.42
HMGCL-209ENST00000513148 GP9P14770 177 aa12.4□□□□□ -0.42
HMGCL-209ENST00000513148 RNASEKQ6P5S7 137 aaKnown RBP12.4□□□□□ -0.42
HMGCL-209ENST00000513148 SPATA12Q7Z6I5 190 aa12.4□□□□□ -0.42
HMGCL-209ENST00000513148 STPG3Q8N7X2 389 aa12.4□□□□□ -0.42
HMGCL-209ENST00000513148 A0A1B0GXF2 115 aa12.39□□□□□ -0.43
HMGCL-209ENST00000513148 WI2-2373I1.2A0A1W2PRP0 233 aa12.39□□□□□ -0.43
HMGCL-209ENST00000513148 K7EP34 96 aa12.39□□□□□ -0.43
HMGCL-209ENST00000513148 TAS2R45P59539 299 aa12.39□□□□□ -0.43
HMGCL-209ENST00000513148 RBPMS2Q6ZRY4 209 aaKnown RBP12.39□□□□□ -0.43
HMGCL-209ENST00000513148 C5orf17Q8NAS9 161 aa12.39□□□□□ -0.43
HMGCL-209ENST00000513148 RABAC1Q9UI14 185 aa12.39□□□□□ -0.43
HMGCL-209ENST00000513148 SORL1Q92673 2214 aa12.39□□□□□ -0.43
HMGCL-209ENST00000513148 IGKV3-7A0A075B6H7 116 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 A6NDN8 102 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 TCL1AP56279 114 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 SAMD13Q5VXD3 122 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 LEPROTL1O95214 131 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 ORM2P19652 201 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 C16orf54Q6UWD8 224 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 OR2K2Q8NGT1 345 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 AP1S3Q96PC3 154 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 MAP1LC3CQ9BXW4 147 aa12.38□□□□□ -0.43
HMGCL-209ENST00000513148 DNAH3Q8TD57 4116 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 TMEM189A5PLL7 270 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 FAM231BA6NCW3 169 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 TMEM97Q5BJF2 176 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 HSPB8Q9UJY1 196 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 A0A1B0GV72 72 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 RPL11P62913 178 aaKnown RBP12.37□□□□□ -0.43
HMGCL-209ENST00000513148 GDF5OSQ5U4N7 250 aa12.37□□□□□ -0.43
HMGCL-209ENST00000513148 ZNF785A8K8V0 405 aa12.36□□□□□ -0.43
HMGCL-209ENST00000513148 SIVA1O15304 175 aa12.36□□□□□ -0.43
HMGCL-209ENST00000513148 LINC01545Q5VT33 79 aa12.36□□□□□ -0.43
HMGCL-209ENST00000513148 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
HMGCL-209ENST00000513148 BPIFA4PQ86YQ2 179 aa12.36□□□□□ -0.43
HMGCL-209ENST00000513148 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
HMGCL-209ENST00000513148 NDFIP1Q9BT67 221 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 IGHV1-24A0A0C4DH33 117 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 hDV102S1A0JD36 115 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 K7EIL1 84 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 CT83Q5H943 113 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 C2orf91Q6ZV80 131 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 ERASQ7Z444 233 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 U3KQE9 123 aa12.35□□□□□ -0.43
HMGCL-209ENST00000513148 GGTLC3B5MD39 225 aa12.34□□□□□ -0.43
HMGCL-209ENST00000513148 MGST1P10620 155 aaKnown RBP12.34□□□□□ -0.43
HMGCL-209ENST00000513148 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
HMGCL-209ENST00000513148 GTSCR1Q86UQ5 136 aa12.34□□□□□ -0.43
HMGCL-209ENST00000513148 MRAPQ8TCY5 172 aa12.34□□□□□ -0.43
HMGCL-209ENST00000513148 SSBP4Q9BWG4 385 aaPredicted RBP12.34□□□□□ -0.43
HMGCL-209ENST00000513148 MRPL32Q9BYC8 188 aaKnown RBP12.34□□□□□ -0.43
HMGCL-209ENST00000513148 CLEC5AQ9NY25 188 aa12.34□□□□□ -0.43
HMGCL-209ENST00000513148 LOC102724200A0A096LPH7 203 aaPredicted RBP12.33□□□□□ -0.43
HMGCL-209ENST00000513148 TRAV25A0A0B4J276 109 aa12.33□□□□□ -0.43
HMGCL-209ENST00000513148 ZNF503Q96F45 646 aa12.33□□□□□ -0.43
HMGCL-209ENST00000513148 BUB3O43684 328 aa12.33□□□□□ -0.44
HMGCL-209ENST00000513148 CD7P09564 240 aa12.33□□□□□ -0.44
HMGCL-209ENST00000513148 HBBP68871 147 aa12.33□□□□□ -0.44
HMGCL-209ENST00000513148 WFDC3Q8IUB2 231 aa12.33□□□□□ -0.44
HMGCL-209ENST00000513148 A0A087X0K7 114 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms