RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 ZMAT5Q9UDW3 170 aaKnown RBP10.19□□□□□ -0.78
PCDHA4-202ENST00000512229 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 CD28P10747 220 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 ZNF664Q8N3J9 261 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 ATP6V0BQ99437 205 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 KLK9Q9UKQ9 250 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 CPAMD8Q8IZJ3 1885 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 FN1P02751 2386 aaKnown RBP10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 DEFB136Q30KP8 78 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 MRAP2Q96G30 205 aa10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 CRXO43186 299 aaPredicted RBP10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 ZNF48Q96MX3 618 aaPredicted RBP10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 MCRIP2Q9BUT9 160 aaKnown RBP10.18□□□□□ -0.78
PCDHA4-202ENST00000512229 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 LY6LH3BQJ8 138 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 TNFRSF13BO14836 293 aaPredicted RBP10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 LOXL1Q08397 574 aaPredicted RBP10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 IGHV3-53P01767 116 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 BCL6BQ8N143 479 aaPredicted RBP10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 ZNF503Q96F45 646 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 KLF12Q9Y4X4 402 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 hDV102S1A0JD36 115 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 CD300EQ496F6 205 aaPredicted RBP10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 ARL6IP6Q8N6S5 226 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 MTORP42345 2549 aa10.17□□□□□ -0.78
PCDHA4-202ENST00000512229 KNCNA6PVL3 124 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 TOMM7Q9P0U1 55 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 POLQO75417 2590 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 A6NDX4 124 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 CRYGBP07316 175 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 COPS9Q8WXC6 57 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 LINC01548A6NM66 108 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 EBI3Q14213 229 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 CHCHD5Q9BSY4 110 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 CBY1Q9Y3M2 126 aa10.16□□□□□ -0.78
PCDHA4-202ENST00000512229 MEGF9Q9H1U4 602 aa10.15□□□□□ -0.78
PCDHA4-202ENST00000512229 K7ERU9 68 aa10.15□□□□□ -0.78
PCDHA4-202ENST00000512229 IGLC2P0DOY2 106 aa10.15□□□□□ -0.78
PCDHA4-202ENST00000512229 ZC2HC1BQ5TFG8 222 aa10.15□□□□□ -0.78
PCDHA4-202ENST00000512229 WIPF2Q8TF74 440 aaPredicted RBP10.15□□□□□ -0.78
PCDHA4-202ENST00000512229 ZNF843Q8N446 348 aa10.15□□□□□ -0.79
PCDHA4-202ENST00000512229 PRADC1Q9BSG0 188 aa10.15□□□□□ -0.79
PCDHA4-202ENST00000512229 IGKV3D-20A0A0C4DH25 116 aa10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 RHODO00212 210 aa10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 C3orf56Q8N813 242 aa10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 CCL24O00175 119 aa10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 COA6Q5JTJ3 125 aaKnown RBP10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 APOMO95445 188 aa10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 RIPPLY3P57055 190 aa10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 Q6ZWC4 215 aa10.14□□□□□ -0.79
PCDHA4-202ENST00000512229 TRPT1Q86TN4 253 aaKnown RBP10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 TSSC4Q9Y5U2 329 aaPredicted RBP10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 ZNF815PA8K554 130 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 K7EMT4 169 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 NPYP01303 97 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 SLURP1P55000 103 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 FOXI2Q6ZQN5 318 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 SIGLEC8Q9NYZ4 499 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 FRYLO94915 3013 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 PLNP26678 52 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 GPHB5Q86YW7 130 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 Q8N8P6 123 aa10.13□□□□□ -0.79
PCDHA4-202ENST00000512229 PRAC2D3DTV9 90 aa10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 OR9G4Q8NGQ1 327 aa10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 MRPL16Q9NX20 251 aaKnown RBP10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 LINC00469Q8N7U9 141 aa10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 TRAV26-2A0A0B4J265 109 aa10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 ADARB2-AS1A8MUL3 147 aa10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 A8MWV9 139 aa10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
PCDHA4-202ENST00000512229 SDHAF1A6NFY7 115 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 GNRH2O43555 120 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 DEFB130BP0DP73 79 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 DEFB130AP0DP74 79 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 UNQ9165/PRO28630Q6UXU0 137 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 TMEM89A2RUT3 159 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 PHLDA1Q8WV24 401 aaPredicted RBP10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 POLR3KQ9Y2Y1 108 aaPredicted RBP10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 IGHV1-24A0A0C4DH33 117 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 TRBV12-3P01733 135 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 TEX43Q6ZNM6 134 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 LRRC75A-AS1Q8N1F1 130 aa10.11□□□□□ -0.79
PCDHA4-202ENST00000512229 IGHV4OR15-8A0A075B7B6 117 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 A0A087WW49 117 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 CIDEAO60543 219 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 IGF1P05019 195 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 ORAOV1Q8WV07 137 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 CCDC140Q96MF4 163 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 DOPEY1Q5JWR5 2465 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 C20orf144Q9BQM9 153 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 SMIM2Q9BVW6 85 aa10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 SPAG8Q99932 426 aaPredicted RBP10.1□□□□□ -0.79
PCDHA4-202ENST00000512229 IGHV3-64A0A075B6Q5 118 aa10.09□□□□□ -0.79
PCDHA4-202ENST00000512229 A0A087WX48 190 aa10.09□□□□□ -0.79
PCDHA4-202ENST00000512229 HSD52Q0P140 79 aa10.09□□□□□ -0.79
PCDHA4-202ENST00000512229 STPG4Q8N801 248 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms