RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 RAB4AP20338 218 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 CAV2P51636 162 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 AP2S1P53680 142 aaPredicted RBP3.27□□□□□ -1.89
PTPN13-208ENST00000511105 SNRPD3P62318 126 aaKnown RBP3.27□□□□□ -1.89
PTPN13-208ENST00000511105 RHOBP62745 196 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 C12orf74Q32Q52 190 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 MIC13Q5XKP0 118 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 C1orf158Q8N1D5 194 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 Q8NAQ8 132 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF431Q8TF32 576 aaPredicted RBP3.27□□□□□ -1.89
PTPN13-208ENST00000511105 C7orf33Q8WU49 177 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 SMIM8Q96KF7 97 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 TRGV9Q99603 122 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 TMEM147Q9BVK8 224 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 MAP1LC3CQ9BXW4 147 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 NPVFQ9HCQ7 196 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 HIGD1AQ9Y241 93 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 TP53TG1Q9Y2A0 90 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 ALMS1Q8TCU4 4167 aa3.27□□□□□ -1.89
PTPN13-208ENST00000511105 A0A0J9YX75 114 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 DUXBA0A1W2PPF3 345 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 IGSF23A1L1A6 192 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 HYPMO75409 117 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 LINC00869P0C866 280 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 PSG9Q00887 426 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 HIST1H1AQ02539 215 aaPredicted RBP3.26□□□□□ -1.89
PTPN13-208ENST00000511105 ERCC8Q13216 396 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 KIAA0087Q14695 138 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF846Q147U1 533 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 PSG3Q16557 428 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 HIGD2BQ4VC39 106 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 GCSAMLQ5JQS6 135 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 SPATA31B1PQ5VZV4 182 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 EBLN2Q6P2I7 272 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 TMEM14EPQ6UXP3 125 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 Q6ZQT7 251 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 TMEM144Q7Z5S9 345 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 BAP18Q8IXM2 172 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF738Q8NE65 137 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 OR10P1Q8NGE3 313 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 CIB3Q96Q77 187 aaPredicted RBP3.26□□□□□ -1.89
PTPN13-208ENST00000511105 MGST2Q99735 147 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 TMEM208Q9BTX3 173 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 SMIM3Q9BZL3 60 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 ARV1Q9H2C2 271 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 SAV1Q9H4B6 383 aaPredicted RBP3.26□□□□□ -1.89
PTPN13-208ENST00000511105 TREM1Q9NP99 234 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 APLNQ9ULZ1 77 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 KLK5Q9Y337 293 aaPredicted RBP3.26□□□□□ -1.89
PTPN13-208ENST00000511105 STAB2Q8WWQ8 2551 aa3.26□□□□□ -1.89
PTPN13-208ENST00000511105 DNAH10Q8IVF4 4471 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 IGLV2-18A0A075B6J9 118 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 DEFB131BA0A096LNP1 70 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 TRAV2A0A0B4J234 112 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 INMT-MINDY4F8WBC2 141 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 KRTAP4-16G5E9R7 235 aaPredicted RBP3.25□□□□□ -1.89
PTPN13-208ENST00000511105 SMKR1H3BMG3 65 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 H3BQ15 152 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 H3BRN7 92 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 SLC17A3O00476 420 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 CD5P06127 495 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 DEFB130BP0DP73 79 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 DEFB130AP0DP74 79 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 SLC25A6P12236 298 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 HLA-DRB4P13762 266 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 GALR1P47211 349 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 BAXQ07812 192 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 CLINT1Q14677 625 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 FAM222AQ5U5X8 452 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 MORN3Q6PF18 240 aaPredicted RBP3.25□□□□□ -1.89
PTPN13-208ENST00000511105 LINC00305Q7Z4B0 112 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 ZNF709Q8N972 641 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 BLNKQ8WV28 456 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 C2orf50Q96LR7 162 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 LINC01587Q99440 93 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 SHANK2-AS3Q9BTD1 123 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 RPRMQ9NS64 109 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 OR5AC2Q9NZP5 309 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 HLA-DRB4X5D2U9 266 aa3.25□□□□□ -1.89
PTPN13-208ENST00000511105 UBE2L5PA0A1B0GUS4 154 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 NUPR2A6NF83 97 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 CRXO43186 299 aaPredicted RBP3.24□□□□□ -1.89
PTPN13-208ENST00000511105 SSNA1O43805 119 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 COX7A2P2O60397 106 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 UPK1BO75841 260 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 FABP1P07148 127 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 PYYP10082 97 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 MIFP14174 115 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 CXCL3P19876 107 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 FGF7P21781 194 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 NUTF2P61970 127 aaKnown RBP3.24□□□□□ -1.89
PTPN13-208ENST00000511105 C10orf113Q5VZT2 155 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 AMTNQ6UX39 209 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 FOXI2Q6ZQN5 318 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 MIR17HGQ75NE6 70 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 EXOC3-AS1Q8N2X6 119 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 OR11H7Q8NGC8 314 aa3.24□□□□□ -1.89
PTPN13-208ENST00000511105 ENKURQ8TC29 256 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms