RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 FXYD7P58549 80 aa9.7□□□□□ -0.86
LIN54-210ENST00000510877 RPP21Q9H633 154 aaKnown RBP9.7□□□□□ -0.86
LIN54-210ENST00000510877 IGKV1-6A0A0C4DH72 117 aa9.7□□□□□ -0.86
LIN54-210ENST00000510877 LINC01548A6NM66 108 aa9.7□□□□□ -0.86
LIN54-210ENST00000510877 HBDP02042 147 aa9.7□□□□□ -0.86
LIN54-210ENST00000510877 RNASE8Q8TDE3 154 aaKnown RBP9.7□□□□□ -0.86
LIN54-210ENST00000510877 A0A1W2PRE2 83 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 FAM231BA6NCW3 169 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 INSP01308 110 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 POU2AF1Q16633 256 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 SLC50A1Q9BRV3 221 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 MAP1AP78559 2803 aaPredicted RBP9.69□□□□□ -0.86
LIN54-210ENST00000510877 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 FAM90A9PA6NNJ1 464 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 ORMDL3Q8N138 153 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 C2orf70A6NJV1 201 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 C9JCJ5 164 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 PSCAO43653 123 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 DNAL4O96015 105 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
LIN54-210ENST00000510877 A0A087X0K7 114 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 TMSB15BA0A087X1C1 80 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 TRGV4A0A0C4DH28 118 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 C9JQL5 133 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 DPM2O94777 84 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 DEFB125Q8N687 156 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 RAI1Q7Z5J4 1906 aaPredicted RBP9.68□□□□□ -0.86
LIN54-210ENST00000510877 IGHV7-4-1A0A0J9YVY3 117 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 STPG4Q8N801 248 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 SYS1-DBNDD2H3BUS1 97 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 CCL25O15444 150 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 QRFPP83859 136 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 FAM90A2PQ658T7 463 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
LIN54-210ENST00000510877 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 RNF183Q96D59 192 aa9.68□□□□□ -0.86
LIN54-210ENST00000510877 NDUFA3O95167 84 aa9.67□□□□□ -0.86
LIN54-210ENST00000510877 C9orf153Q5TBE3 101 aa9.67□□□□□ -0.86
LIN54-210ENST00000510877 Q6ZS46 218 aa9.67□□□□□ -0.86
LIN54-210ENST00000510877 C1orf147Q96MC9 270 aaPredicted RBP9.67□□□□□ -0.86
LIN54-210ENST00000510877 SRRM4A7MD48 611 aaKnown RBP9.66□□□□□ -0.86
LIN54-210ENST00000510877 LEPP41159 167 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 LHFPL1Q86WI0 220 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 KALRNO60229 2985 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 PEX7O00628 323 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 PPP1R17O96001 155 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 SYT8Q8NBV8 401 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 PPDPFLQ8WWR9 84 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 TRAV8-1A0A0A6YYK1 113 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 FOXI3A8MTJ6 420 aaPredicted RBP9.66□□□□□ -0.86
LIN54-210ENST00000510877 LY6G6CO95867 125 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 LINC00482Q8N8I6 264 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 IGLL5B9A064 214 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 PMVKQ15126 192 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 IFI27L1Q96BM0 104 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 GFI1Q99684 422 aa9.66□□□□□ -0.86
LIN54-210ENST00000510877 C11orf68Q9H3H3 251 aaKnown RBP9.66□□□□□ -0.86
LIN54-210ENST00000510877 TMEM61Q8N0U2 210 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 TMEM101Q96IK0 257 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 C15orf62A8K5M9 175 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 KRTAP1-1Q07627 177 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 GPHB5Q86YW7 130 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 RITA1Q96K30 269 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 CACNG7P62955 275 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 EBI3Q14213 229 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 TSKUQ8WUA8 353 aa9.65□□□□□ -0.86
LIN54-210ENST00000510877 SPRY2O43597 315 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 IFITM1P13164 125 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 NAA38Q9BRA0 125 aaKnown RBP9.64□□□□□ -0.87
LIN54-210ENST00000510877 A0A096LNT2 108 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 KNCNA6PVL3 124 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 MGPP08493 103 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 APRG1Q8IVJ8 170 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 C18orf15Q96N68 181 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 NXT2Q9NPJ8 142 aaKnown RBP9.64□□□□□ -0.87
LIN54-210ENST00000510877 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 SLAQ13239 276 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 C11orf45Q8TAV5 145 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 TEX48A0A1B0GUV7 120 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
LIN54-210ENST00000510877 SPART-AS1P0CW21 52 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 GATA2P23769 480 aaPredicted RBP9.64□□□□□ -0.87
LIN54-210ENST00000510877 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
LIN54-210ENST00000510877 COL12A1Q99715 3063 aa9.64□□□□□ -0.87
LIN54-210ENST00000510877 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
LIN54-210ENST00000510877 IGKCP01834 107 aa9.63□□□□□ -0.87
LIN54-210ENST00000510877 TMEM14BQ9NUH8 114 aa9.63□□□□□ -0.87
LIN54-210ENST00000510877 RNASE7Q9H1E1 156 aaKnown RBP9.63□□□□□ -0.87
LIN54-210ENST00000510877 NDUFA4L2Q9NRX3 87 aa9.63□□□□□ -0.87
LIN54-210ENST00000510877 TRBV20OR9-2A0A075B6H5 130 aa9.63□□□□□ -0.87
LIN54-210ENST00000510877 CGB3P0DN86 165 aa9.63□□□□□ -0.87
LIN54-210ENST00000510877 CGB7P0DN87 165 aa9.63□□□□□ -0.87
LIN54-210ENST00000510877 SUPT4H1P63272 117 aaKnown RBP9.63□□□□□ -0.87
LIN54-210ENST00000510877 Q6ZWC4 215 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms