RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 GGTLC3B5MD39 225 aa14.54□□□□□ -0.08
LIN54-208ENST00000509748 TYMSP04818 313 aa14.54□□□□□ -0.08
LIN54-208ENST00000509748 ZNF80P51504 273 aaPredicted RBP14.54□□□□□ -0.08
LIN54-208ENST00000509748 INO80EQ8NBZ0 244 aaPredicted RBP14.54□□□□□ -0.08
LIN54-208ENST00000509748 ACTR3CQ9C0K3 210 aaPredicted RBP14.54□□□□□ -0.08
LIN54-208ENST00000509748 FXYD6-FXYD2A0A087WZ82 144 aa14.53□□□□□ -0.08
LIN54-208ENST00000509748 SERTM2A0A1B0GWG4 89 aa14.53□□□□□ -0.08
LIN54-208ENST00000509748 CXorf1O96002 111 aa14.53□□□□□ -0.08
LIN54-208ENST00000509748 SUMO1P63165 101 aaKnown RBP14.53□□□□□ -0.08
LIN54-208ENST00000509748 ZNF726P1Q15940 193 aa14.53□□□□□ -0.08
LIN54-208ENST00000509748 LYPD5Q6UWN5 251 aa14.53□□□□□ -0.08
LIN54-208ENST00000509748 OR2T35Q8NGX2 323 aa14.53□□□□□ -0.08
LIN54-208ENST00000509748 C11orf21Q9P2W6 132 aa14.53□□□□□ -0.08
LIN54-208ENST00000509748 TRGV4A0A0C4DH28 118 aa14.52□□□□□ -0.09
LIN54-208ENST00000509748 MRPL23Q16540 153 aaKnown RBP14.52□□□□□ -0.09
LIN54-208ENST00000509748 TMEM167BQ9NRX6 74 aa14.52□□□□□ -0.09
LIN54-208ENST00000509748 EPDR1Q9UM22 224 aa14.52□□□□□ -0.09
LIN54-208ENST00000509748 PSG8Q9UQ74 426 aa14.52□□□□□ -0.09
LIN54-208ENST00000509748 HSPG2P98160 4391 aa14.52□□□□□ -0.09
LIN54-208ENST00000509748 M0R2P5 195 aa14.51□□□□□ -0.09
LIN54-208ENST00000509748 NXPH4O95158 308 aa14.51□□□□□ -0.09
LIN54-208ENST00000509748 BTF3P20290 206 aaKnown RBP14.51□□□□□ -0.09
LIN54-208ENST00000509748 BORCS7-ASMTA0A0B4J1R7 106 aa14.5□□□□□ -0.09
LIN54-208ENST00000509748 TRAV4A0A0B4J268 109 aa14.5□□□□□ -0.09
LIN54-208ENST00000509748 K7EQD1 137 aa14.5□□□□□ -0.09
LIN54-208ENST00000509748 SIVA1O15304 175 aa14.5□□□□□ -0.09
LIN54-208ENST00000509748 KCNS1Q96KK3 526 aa14.5□□□□□ -0.09
LIN54-208ENST00000509748 SDF2L1Q9HCN8 221 aa14.5□□□□□ -0.09
LIN54-208ENST00000509748 RGS21Q2M5E4 152 aa14.49□□□□□ -0.09
LIN54-208ENST00000509748 Q6ZRN7 208 aaPredicted RBP14.49□□□□□ -0.09
LIN54-208ENST00000509748 NEGR1Q7Z3B1 354 aa14.49□□□□□ -0.09
LIN54-208ENST00000509748 NDFIP1Q9BT67 221 aa14.49□□□□□ -0.09
LIN54-208ENST00000509748 A0A1W2PRE2 83 aa14.48□□□□□ -0.09
LIN54-208ENST00000509748 FLI1Q01543 452 aaPredicted RBP14.48□□□□□ -0.09
LIN54-208ENST00000509748 CYB561D1Q8N8Q1 229 aa14.48□□□□□ -0.09
LIN54-208ENST00000509748 OR4C5Q8NGB2 326 aa14.48□□□□□ -0.09
LIN54-208ENST00000509748 CYTL1Q9NRR1 136 aa14.48□□□□□ -0.09
LIN54-208ENST00000509748 DNAH5Q8TE73 4624 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 CTXND1A0A1B0GTU2 59 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 C16orf90A8MZG2 172 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 K7EQM0 130 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 GCGP01275 180 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 GYPEP15421 78 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 LINC00315P59091 139 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 TMEM75Q8N9X5 138 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 LINC00479Q96M42 142 aa14.47□□□□□ -0.09
LIN54-208ENST00000509748 TAAR5O14804 337 aa14.46□□□□□ -0.09
LIN54-208ENST00000509748 PFN1P07737 140 aaKnown RBP14.46□□□□□ -0.09
LIN54-208ENST00000509748 PRNTQ86SH4 94 aa14.46□□□□□ -0.09
LIN54-208ENST00000509748 LOC100131303A0A0U1RQF7 123 aa14.45□□□□□ -0.1
LIN54-208ENST00000509748 ORM1P02763 201 aa14.45□□□□□ -0.1
LIN54-208ENST00000509748 SRIP30626 198 aa14.45□□□□□ -0.1
LIN54-208ENST00000509748 SMUG1Q53HV7 270 aa14.45□□□□□ -0.1
LIN54-208ENST00000509748 DPPA3Q6W0C5 159 aa14.45□□□□□ -0.1
LIN54-208ENST00000509748 C9orf85Q96MD7 179 aa14.45□□□□□ -0.1
LIN54-208ENST00000509748 TRAV34A0A0B4J273 112 aa14.44□□□□□ -0.1
LIN54-208ENST00000509748 FBLL1A6NHQ2 334 aaKnown RBP14.44□□□□□ -0.1
LIN54-208ENST00000509748 GATA1P15976 413 aaPredicted RBP14.44□□□□□ -0.1
LIN54-208ENST00000509748 SPATA12Q7Z6I5 190 aa14.44□□□□□ -0.1
LIN54-208ENST00000509748 TNFRSF18Q9Y5U5 241 aa14.44□□□□□ -0.1
LIN54-208ENST00000509748 APOBP04114 4563 aaKnown RBP14.44□□□□□ -0.1
LIN54-208ENST00000509748 SMLR1H3BR10 107 aa14.43□□□□□ -0.1
LIN54-208ENST00000509748 ARPC5O15511 151 aa14.43□□□□□ -0.1
LIN54-208ENST00000509748 FGF8P55075 233 aaPredicted RBP14.43□□□□□ -0.1
LIN54-208ENST00000509748 KRTAP10-2P60368 255 aa14.43□□□□□ -0.1
LIN54-208ENST00000509748 SAPCD1Q5SSQ6 148 aa14.43□□□□□ -0.1
LIN54-208ENST00000509748 ABCA13Q86UQ4 5058 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 FAM74A7A6NL05 159 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 C9JCJ5 164 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 RS1O15537 224 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 RNASE3P12724 160 aaKnown RBP14.42□□□□□ -0.1
LIN54-208ENST00000509748 UBE2G2P60604 165 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 ZNF876PQ49A33 203 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 AKR1C8PQ5T2L2 129 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 CFAP126Q5VTH2 177 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 WFDC10BQ8IUB3 73 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 PCNPQ8WW12 178 aaKnown RBP14.42□□□□□ -0.1
LIN54-208ENST00000509748 PTH2Q96A98 100 aa14.42□□□□□ -0.1
LIN54-208ENST00000509748 PGPEP1LA6NFU8 196 aa14.41□□□□□ -0.1
LIN54-208ENST00000509748 ARL2-SNX15V9GYD0 113 aa14.41□□□□□ -0.1
LIN54-208ENST00000509748 IGKV3D-20A0A0C4DH25 116 aa14.4□□□□□ -0.1
LIN54-208ENST00000509748 CDK2AP2O75956 126 aa14.4□□□□□ -0.1
LIN54-208ENST00000509748 ZFP69Q49AA0 526 aa14.4□□□□□ -0.1
LIN54-208ENST00000509748 TXNDC17Q9BRA2 123 aa14.4□□□□□ -0.1
LIN54-208ENST00000509748 KRTAP4-5Q9BYR2 181 aa14.4□□□□□ -0.1
LIN54-208ENST00000509748 PEX7O00628 323 aa14.39□□□□□ -0.11
LIN54-208ENST00000509748 IFNA7P01567 189 aa14.39□□□□□ -0.11
LIN54-208ENST00000509748 ZNF506Q5JVG8 444 aa14.39□□□□□ -0.11
LIN54-208ENST00000509748 SLC25A29Q8N8R3 303 aa14.39□□□□□ -0.11
LIN54-208ENST00000509748 MAP1LC3B2A6NCE7 125 aa14.38□□□□□ -0.11
LIN54-208ENST00000509748 DNAH10OSP0CZ25 163 aa14.38□□□□□ -0.11
LIN54-208ENST00000509748 TIRAPP58753 221 aa14.38□□□□□ -0.11
LIN54-208ENST00000509748 Q86TA4 180 aa14.38□□□□□ -0.11
LIN54-208ENST00000509748 NKX6-2Q9C056 277 aaPredicted RBP14.38□□□□□ -0.11
LIN54-208ENST00000509748 MAP1LC3BQ9GZQ8 125 aa14.38□□□□□ -0.11
LIN54-208ENST00000509748 LY96Q9Y6Y9 160 aa14.38□□□□□ -0.11
LIN54-208ENST00000509748 CIDEAO60543 219 aa14.37□□□□□ -0.11
LIN54-208ENST00000509748 FHITP49789 147 aa14.37□□□□□ -0.11
LIN54-208ENST00000509748 CRIP1P50238 77 aa14.37□□□□□ -0.11
LIN54-208ENST00000509748 COX8CQ7Z4L0 72 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms