RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 MED28Q9H204 178 aa10.98□□□□□ -0.65
HOXC4-203ENST00000507650 GCHFRP30047 84 aa10.97□□□□□ -0.65
HOXC4-203ENST00000507650 ZNF726P1Q15940 193 aa10.97□□□□□ -0.65
HOXC4-203ENST00000507650 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
HOXC4-203ENST00000507650 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
HOXC4-203ENST00000507650 TRGV11A0A075B6L2 103 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 K7EQD1 137 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 SIVA1O15304 175 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 TCRAP04437 139 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 TMEM75Q8N9X5 138 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 SPXQ9BT56 116 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 TREM1Q9NP99 234 aa10.96□□□□□ -0.65
HOXC4-203ENST00000507650 GIPP09681 153 aaPredicted RBP10.95□□□□□ -0.66
HOXC4-203ENST00000507650 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
HOXC4-203ENST00000507650 RPL7L1Q6DKI1 246 aaKnown RBP10.95□□□□□ -0.66
HOXC4-203ENST00000507650 TRAV4A0A0B4J268 109 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 TRAV21A0A0B4J279 112 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 TRGV4A0A0C4DH28 118 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 CDK2AP2O75956 126 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 FUSP35637 526 aaKnown RBP eCLIP10.94□□□□□ -0.66
HOXC4-203ENST00000507650 FAM74A1Q5RGS3 127 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 DPPA3Q6W0C5 159 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 WFDC10BQ8IUB3 73 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 C5orf17Q8NAS9 161 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 TNFSF18Q9UNG2 199 aa10.94□□□□□ -0.66
HOXC4-203ENST00000507650 M0R2P5 195 aa10.93□□□□□ -0.66
HOXC4-203ENST00000507650 GYPEP15421 78 aa10.93□□□□□ -0.66
HOXC4-203ENST00000507650 MRPL23Q16540 153 aaKnown RBP10.93□□□□□ -0.66
HOXC4-203ENST00000507650 NEGR1Q7Z3B1 354 aa10.93□□□□□ -0.66
HOXC4-203ENST00000507650 PSG8Q9UQ74 426 aa10.93□□□□□ -0.66
HOXC4-203ENST00000507650 SERF2P84101 59 aa10.92□□□□□ -0.66
HOXC4-203ENST00000507650 SLAQ13239 276 aa10.92□□□□□ -0.66
HOXC4-203ENST00000507650 LINC00479Q96M42 142 aa10.92□□□□□ -0.66
HOXC4-203ENST00000507650 EPDR1Q9UM22 224 aa10.92□□□□□ -0.66
HOXC4-203ENST00000507650 FXYD6-FXYD2A0A087WZ82 144 aa10.91□□□□□ -0.66
HOXC4-203ENST00000507650 GATA1P15976 413 aaPredicted RBP10.91□□□□□ -0.66
HOXC4-203ENST00000507650 SUMO1P63165 101 aaKnown RBP10.91□□□□□ -0.66
HOXC4-203ENST00000507650 ASB13Q8WXK3 278 aa10.91□□□□□ -0.66
HOXC4-203ENST00000507650 C9orf85Q96MD7 179 aa10.91□□□□□ -0.66
HOXC4-203ENST00000507650 SDF2L1Q9HCN8 221 aa10.91□□□□□ -0.66
HOXC4-203ENST00000507650 TRAV34A0A0B4J273 112 aa10.9□□□□□ -0.66
HOXC4-203ENST00000507650 SERTM2A0A1B0GWG4 89 aa10.9□□□□□ -0.66
HOXC4-203ENST00000507650 CXorf1O96002 111 aa10.9□□□□□ -0.66
HOXC4-203ENST00000507650 GCGP01275 180 aa10.9□□□□□ -0.66
HOXC4-203ENST00000507650 SRIP30626 198 aa10.9□□□□□ -0.66
HOXC4-203ENST00000507650 OR4C5Q8NGB2 326 aa10.9□□□□□ -0.66
HOXC4-203ENST00000507650 CYTL1Q9NRR1 136 aa10.9□□□□□ -0.66
HOXC4-203ENST00000507650 MBP02144 154 aa10.89□□□□□ -0.67
HOXC4-203ENST00000507650 PFN1P07737 140 aaKnown RBP10.89□□□□□ -0.67
HOXC4-203ENST00000507650 DNAH10OSP0CZ25 163 aa10.89□□□□□ -0.67
HOXC4-203ENST00000507650 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
HOXC4-203ENST00000507650 FLI1Q01543 452 aaPredicted RBP10.89□□□□□ -0.67
HOXC4-203ENST00000507650 PRNTQ86SH4 94 aa10.89□□□□□ -0.67
HOXC4-203ENST00000507650 CYB561D1Q8N8Q1 229 aa10.89□□□□□ -0.67
HOXC4-203ENST00000507650 OR2T35Q8NGX2 323 aa10.89□□□□□ -0.67
HOXC4-203ENST00000507650 ACTR3CQ9C0K3 210 aaPredicted RBP10.89□□□□□ -0.67
HOXC4-203ENST00000507650 TMEM167BQ9NRX6 74 aa10.89□□□□□ -0.67
HOXC4-203ENST00000507650 FAT1Q14517 4588 aa10.89□□□□□ -0.67
HOXC4-203ENST00000507650 IGKV3D-20A0A0C4DH25 116 aa10.88□□□□□ -0.67
HOXC4-203ENST00000507650 PGPEP1LA6NFU8 196 aa10.88□□□□□ -0.67
HOXC4-203ENST00000507650 RS1O15537 224 aa10.88□□□□□ -0.67
HOXC4-203ENST00000507650 FGF8P55075 233 aaPredicted RBP10.88□□□□□ -0.67
HOXC4-203ENST00000507650 CFAP126Q5VTH2 177 aa10.88□□□□□ -0.67
HOXC4-203ENST00000507650 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
HOXC4-203ENST00000507650 A0A1W2PRE2 83 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 C9JCJ5 164 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 SMLR1H3BR10 107 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 ORM1P02763 201 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 UBE2G2P60604 165 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 SLC25A29Q8N8R3 303 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 INO80EQ8NBZ0 244 aaPredicted RBP10.87□□□□□ -0.67
HOXC4-203ENST00000507650 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
HOXC4-203ENST00000507650 IGHV3-73A0A0B4J1V6 119 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 CTXND1A0A1B0GTU2 59 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 FAM74A7A6NL05 159 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 ZNF876PQ49A33 203 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 SMUG1Q53HV7 270 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 Q6ZSN1 163 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 Q86TA4 180 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 LY96Q9Y6Y9 160 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 ARL2-SNX15V9GYD0 113 aa10.86□□□□□ -0.67
HOXC4-203ENST00000507650 TAAR5O14804 337 aa10.85□□□□□ -0.67
HOXC4-203ENST00000507650 CRIP1P50238 77 aa10.85□□□□□ -0.67
HOXC4-203ENST00000507650 PCNPQ8WW12 178 aaKnown RBP10.85□□□□□ -0.67
HOXC4-203ENST00000507650 Q9UF83 564 aa10.85□□□□□ -0.67
HOXC4-203ENST00000507650 BORCS7-ASMTA0A0B4J1R7 106 aa10.84□□□□□ -0.67
HOXC4-203ENST00000507650 FBLL1A6NHQ2 334 aaKnown RBP10.84□□□□□ -0.67
HOXC4-203ENST00000507650 PEX7O00628 323 aa10.84□□□□□ -0.67
HOXC4-203ENST00000507650 PTH2Q96A98 100 aa10.84□□□□□ -0.67
HOXC4-203ENST00000507650 TXNDC17Q9BRA2 123 aa10.84□□□□□ -0.67
HOXC4-203ENST00000507650 A0A087WTM6 91 aa10.83□□□□□ -0.68
HOXC4-203ENST00000507650 K7EQM0 130 aa10.83□□□□□ -0.68
HOXC4-203ENST00000507650 ARPC5O15511 151 aa10.83□□□□□ -0.68
HOXC4-203ENST00000507650 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
HOXC4-203ENST00000507650 FHITP49789 147 aa10.83□□□□□ -0.68
HOXC4-203ENST00000507650 TIRAPP58753 221 aa10.83□□□□□ -0.68
HOXC4-203ENST00000507650 Q8N1X5 172 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms