RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 EMP1P54849 157 aa14.45□□□□□ -0.1
USP53-203ENST00000507597 TMEM241Q24JQ0 296 aa14.45□□□□□ -0.1
USP53-203ENST00000507597 SPXQ9BT56 116 aa14.45□□□□□ -0.1
USP53-203ENST00000507597 NBEAL2Q6ZNJ1 2754 aa14.44□□□□□ -0.1
USP53-203ENST00000507597 AZU1P20160 251 aa14.44□□□□□ -0.1
USP53-203ENST00000507597 OR5I1Q13606 314 aa14.44□□□□□ -0.1
USP53-203ENST00000507597 LINC00862A6NCI5 91 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 DEFB4AO15263 64 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 CRIP1P50238 77 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 RPS20P60866 119 aaKnown RBP14.43□□□□□ -0.1
USP53-203ENST00000507597 SRSF3P84103 164 aaKnown RBP14.43□□□□□ -0.1
USP53-203ENST00000507597 DAZ2Q13117 558 aaKnown RBP14.43□□□□□ -0.1
USP53-203ENST00000507597 LINC01559Q495D7 138 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 OCC1Q8TAD7 63 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 C11orf45Q8TAV5 145 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 WWC2-AS2Q96NR7 200 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 NAT8Q9UHE5 227 aa14.43□□□□□ -0.1
USP53-203ENST00000507597 TRBV20OR9-2A0A075B6H5 130 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 IGLV2-8P01709 118 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 P01737 135 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 ASIPP42127 132 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 TCL1AP56279 114 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 COMMD7Q86VX2 200 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 EDA2RQ9HAV5 297 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 TP53TG3Q9ULZ0 132 aa14.42□□□□□ -0.1
USP53-203ENST00000507597 TYMSP04818 313 aa14.41□□□□□ -0.1
USP53-203ENST00000507597 CXCL1P09341 107 aa14.41□□□□□ -0.1
USP53-203ENST00000507597 Q6ZQT7 251 aa14.41□□□□□ -0.1
USP53-203ENST00000507597 GSN-AS1Q9NRJ2 163 aa14.41□□□□□ -0.1
USP53-203ENST00000507597 DKK2Q9UBU2 259 aa14.41□□□□□ -0.1
USP53-203ENST00000507597 KRBOX1C9JBD0 128 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 C9JQL5 133 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 M0R036 132 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 GNRH2O43555 120 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 PRM2P04554 102 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 SFTA3P0C7M3 94 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 LGALS9BQ3B8N2 356 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 FAM222AQ5U5X8 452 aa14.4□□□□□ -0.1
USP53-203ENST00000507597 NOP10Q9NPE3 64 aaKnown RBP14.4□□□□□ -0.1
USP53-203ENST00000507597 PRKDCP78527 4128 aaKnown RBP14.4□□□□□ -0.1
USP53-203ENST00000507597 IGKV3D-20A0A0C4DH25 116 aa14.39□□□□□ -0.11
USP53-203ENST00000507597 PGPEP1LA6NFU8 196 aa14.39□□□□□ -0.11
USP53-203ENST00000507597 DAD1P61803 113 aa14.39□□□□□ -0.11
USP53-203ENST00000507597 DNLZQ5SXM8 178 aa14.39□□□□□ -0.11
USP53-203ENST00000507597 LINC01551Q86U37 167 aa14.39□□□□□ -0.11
USP53-203ENST00000507597 C11orf72Q8NBR9 251 aa14.39□□□□□ -0.11
USP53-203ENST00000507597 C11orf21Q9P2W6 132 aa14.39□□□□□ -0.11
USP53-203ENST00000507597 IGHV3-16A0A0C4DH30 117 aa14.38□□□□□ -0.11
USP53-203ENST00000507597 C19orf71A6NCJ1 209 aa14.38□□□□□ -0.11
USP53-203ENST00000507597 ERVFC1-1P60608 527 aa14.38□□□□□ -0.11
USP53-203ENST00000507597 FAM231DQ6ZW35 169 aa14.38□□□□□ -0.11
USP53-203ENST00000507597 C15orf54Q8N8G6 183 aa14.38□□□□□ -0.11
USP53-203ENST00000507597 DNAH9Q9NYC9 4486 aa14.37□□□□□ -0.11
USP53-203ENST00000507597 PLAC8L1A1L4L8 177 aa14.37□□□□□ -0.11
USP53-203ENST00000507597 PNRC1Q12796 327 aaPredicted RBP14.37□□□□□ -0.11
USP53-203ENST00000507597 OR2D3Q8NGH3 330 aa14.37□□□□□ -0.11
USP53-203ENST00000507597 NDUFAF3Q9BU61 184 aa14.37□□□□□ -0.11
USP53-203ENST00000507597 MDFICQ9P1T7 246 aa14.37□□□□□ -0.11
USP53-203ENST00000507597 M0R2P5 195 aa14.36□□□□□ -0.11
USP53-203ENST00000507597 GATCO43716 136 aaKnown RBP14.36□□□□□ -0.11
USP53-203ENST00000507597 MED14OSP0DP75 135 aa14.36□□□□□ -0.11
USP53-203ENST00000507597 ADIRFQ15847 76 aa14.36□□□□□ -0.11
USP53-203ENST00000507597 NUDT10Q8NFP7 164 aa14.36□□□□□ -0.11
USP53-203ENST00000507597 NUDT11Q96G61 164 aa14.36□□□□□ -0.11
USP53-203ENST00000507597 IL36BQ9NZH7 164 aa14.36□□□□□ -0.11
USP53-203ENST00000507597 TMSB15BA0A087X1C1 80 aa14.35□□□□□ -0.11
USP53-203ENST00000507597 TRGV1A0A0A0MS02 117 aa14.35□□□□□ -0.11
USP53-203ENST00000507597 TMEM218A2RU14 115 aa14.35□□□□□ -0.11
USP53-203ENST00000507597 K7EN84 100 aa14.35□□□□□ -0.11
USP53-203ENST00000507597 SPINK4O60575 86 aa14.35□□□□□ -0.11
USP53-203ENST00000507597 SYT8Q8NBV8 401 aa14.35□□□□□ -0.11
USP53-203ENST00000507597 RPP21Q9H633 154 aaKnown RBP14.35□□□□□ -0.11
USP53-203ENST00000507597 OSTCQ9NRP0 149 aa14.35□□□□□ -0.11
USP53-203ENST00000507597 TRGV2A0A075B6R0 118 aa14.34□□□□□ -0.11
USP53-203ENST00000507597 F8W036 122 aa14.34□□□□□ -0.11
USP53-203ENST00000507597 DEFB130BP0DP73 79 aa14.34□□□□□ -0.11
USP53-203ENST00000507597 DEFB130AP0DP74 79 aa14.34□□□□□ -0.11
USP53-203ENST00000507597 RPL23P62829 140 aaKnown RBP14.34□□□□□ -0.11
USP53-203ENST00000507597 PIK3CD-AS1Q5SR53 167 aa14.34□□□□□ -0.11
USP53-203ENST00000507597 PTH2Q96A98 100 aa14.34□□□□□ -0.11
USP53-203ENST00000507597 PHLDA3Q9Y5J5 127 aa14.34□□□□□ -0.11
USP53-203ENST00000507597 A0A1W2PPQ1 181 aa14.33□□□□□ -0.12
USP53-203ENST00000507597 GRIFINA4D1Z8 144 aa14.33□□□□□ -0.12
USP53-203ENST00000507597 A8MWL6 223 aa14.33□□□□□ -0.12
USP53-203ENST00000507597 ARMS2P0C7Q2 107 aa14.33□□□□□ -0.12
USP53-203ENST00000507597 C9orf85Q96MD7 179 aa14.33□□□□□ -0.12
USP53-203ENST00000507597 RNASE7Q9H1E1 156 aaKnown RBP14.33□□□□□ -0.12
USP53-203ENST00000507597 CELA1Q9UNI1 258 aa14.33□□□□□ -0.12
USP53-203ENST00000507597 TGP01266 2768 aa14.33□□□□□ -0.12
USP53-203ENST00000507597 TRAV10A0A0B4J240 114 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 GAGE12BA1L429 117 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 F2Z2F3 143 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 GAGE7O76087 117 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 GAGE12FP0CL80 117 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 GAGE12GP0CL81 117 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 GAGE12IP0CL82 117 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 NANOS2P60321 138 aaKnown RBP14.32□□□□□ -0.12
USP53-203ENST00000507597 NDUFA5Q16718 116 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 C12orf74Q32Q52 190 aa14.32□□□□□ -0.12
USP53-203ENST00000507597 CT83Q5H943 113 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms